G1107977


Basic Information

Item Value
gene id G1107977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 72048506 ~ 72048709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1259751
tcgctggccatggcagaacactgacattcctgtcttgcaggaaatcacgccaagaacgagcagtatggctggtggcattgtcatgctggaagggtaccacatgagggaggtggatgtctttcctgtaatgcacagcgttgagattgcctgcaatgacaacaggctcagaccgatgatgctgtgacacaccgccccagtcctgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1259751 True 204 lncRNA 0.54 1 72048506 72048709

Neighbor

gene id symbol gene type direction distance location
micall2a LOC106601118 coding upstream 10622 72022539 ~ 72037884 (+)
LOC110538241 LOC106607115 coding upstream 29361 72016045 ~ 72019145 (+)
LOC110538240 LOC106607338 coding upstream 37646 71989879 ~ 72010860 (+)
tmem184a LOC106607336 coding upstream 82850 71948230 ~ 71965656 (+)
psmg3 psmg3 coding upstream 105702 71941515 ~ 71942804 (+)
zfand2a LOC106601116 coding downstream 76503 72125212 ~ 72130074 (+)
LOC110538247 LOC106601153 coding downstream 103457 72152166 ~ 72161329 (+)
trnat-cgu-3 NA coding downstream 180789 72229498 ~ 72229569 (+)
LOC110538251 z3h7a coding downstream 213612 72262321 ~ 72273102 (+)
LOC110538257 LOC106601112 coding downstream 254599 72303308 ~ 72313156 (+)
G1106236 NA non-coding upstream 30964 72017325 ~ 72017542 (+)
G1106195 NA non-coding upstream 80380 71930185 ~ 71968126 (+)
G1106205 LOC100194703 non-coding upstream 101170 71945727 ~ 71947336 (+)
G1106146 NA non-coding upstream 203783 71844369 ~ 71844723 (+)
G1107994 NA non-coding downstream 23682 72072391 ~ 72072747 (+)
G1108000 NA non-coding downstream 32326 72081035 ~ 72081346 (+)
G1108001 NA non-coding downstream 33084 72081793 ~ 72082010 (+)
G1108025 NA non-coding downstream 59511 72108220 ~ 72108622 (+)
G1108041 NA non-coding downstream 92966 72141675 ~ 72142014 (+)
G1105655 NA other upstream 1142077 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 1414535 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1677295 70370755 ~ 70371211 (+)
G1109505 NA other downstream 1256716 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1336099 73384755 ~ 73386199 (+)
G1109778 NA other downstream 1784934 73833643 ~ 73834606 (+)
G1109786 NA other downstream 1797546 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 2911557 74960266 ~ 75048356 (+)

Expression


Co-expression Network