G1106205 (LOC100194703)


Basic Information

Item Value
gene id G1106205
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71945727 ~ 71947336 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257765
catgaataaagaatggtaccaacacatcctccgagagcaacttctcccaaccatccaggaacagtttgttgacgaacaatgccttttccagcatgatggagtacCTTGCCAAAAGGCAAAAGTGACAAcaaagtggctcggggaacaaaacatcaatattttgggaccatggccaggaaactccccagaccttaatcccattgagaacttgtggtcaatcctcaagaggtgaaAGGACAAACAAAAaaccacaaattctgacaaaatccaagcattgattatgtaaAAATGggcagacatcagtcaggatgtggcccagaagttaattgacagcatgccagggtggattgcagaggtactgcaaaaaatattgactctttgcatcaacttcatgtaattgtcaataaaaagcCTTTGACACCTGTGAAATGCTTGAAATTATACtgcagtattccatagtaacatctgacaaaaatatctaaagacactgaagcagcaaactttgtggaaattaatatttgtgtcattctcaacttttggccacgacgttgcttcaatatatgtacatacttttcctgcctcatgatgccatctattttgttaagtgcactagtccctcctgcagcaaagcacccccacaacatgatgctgccacccctgtgcttcacagttgggatggtgttcttcggcttgcaagcatccccctttttcctccaaacataacgatggtcattatggccaaacagttgtatttttgtttcatcagaccagaggacatttctccaaaaagtacgatatttgtccccatgtgcagttgcaatctgtagtctggcttttttatggtggttttggagcagtggcttcatccttgctgagcagcctttcaggttatgtcaatataggactcgttttactgtggatatagatacttttgtacctgtttcccccagcatcttcacatggtcctttgctgttgttctgggattgatttgcacttttcgcactaaagtacgttcatctctaggagaccgaacgcgtctccttcctgagcggtatgacggctgcgtggtcccatggtgtttatacttgcatactattgtttgtacagatgaacatggtaccttcaggcatttggaaattgttcccaaggatgaatcagacttgtggaggtctacaattttttttctgaggtcttggctgatttcttttgattttcccatgatatcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaatttaatcaaatgatgtcaattagcctatcagaagcttctaaagccatgagatcattttatggaattttccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatacattgaattataagtgatataatctgtctgtaaacaattgttggaaaaatgacttgtgtcatgcacaaagtagatgtcctaactgacttgccaaaactagtttgtggagtggttgaaaacaagttttaatgactccaacctaagtgtatgtaaacttccaacttcaactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257765 True 1590 lncRNA 0.41 2 71945727 71947336

Neighbor

gene id symbol gene type direction distance location
psmg3 psmg3 coding upstream 2923 71941515 ~ 71942804 (+)
mrm2 rrmj2 coding upstream 290001 71648593 ~ 71655726 (+)
LOC110538233 LOC106607331 coding upstream 299330 71631595 ~ 71646397 (+)
trnaa-ugc-57 NA coding upstream 302445 71643208 ~ 71643282 (+)
lfng LOC106607332 coding upstream 376947 71560690 ~ 71568780 (+)
tmem184a LOC106607336 coding downstream 894 71948230 ~ 71965656 (+)
LOC110538240 LOC106607338 coding downstream 42543 71989879 ~ 72010860 (+)
LOC110538241 LOC106607115 coding downstream 68927 72016045 ~ 72019145 (+)
micall2a LOC106601118 coding downstream 75203 72022539 ~ 72037884 (+)
zfand2a LOC106601116 coding downstream 177876 72125212 ~ 72130074 (+)
G1106146 NA non-coding upstream 101004 71844369 ~ 71844723 (+)
G1106049 NA non-coding upstream 251027 71694464 ~ 71694700 (+)
G1105987 NA non-coding upstream 368420 71573714 ~ 71577307 (+)
G1105982 NA non-coding upstream 386495 71558430 ~ 71559232 (+)
G1105980 NA non-coding upstream 388631 71556873 ~ 71557096 (+)
G1106236 NA non-coding downstream 69989 72017325 ~ 72017542 (+)
G1107977 NA non-coding downstream 101170 72048506 ~ 72048709 (+)
G1107994 NA non-coding downstream 125055 72072391 ~ 72072747 (+)
G1108000 NA non-coding downstream 133699 72081035 ~ 72081346 (+)
G1105655 NA other upstream 1039298 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 1311756 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1574516 70370755 ~ 70371211 (+)
G1105357 NA other upstream 1618601 70324958 ~ 70327126 (+)
G1109505 NA other downstream 1358089 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1437472 73384755 ~ 73386199 (+)
G1109778 NA other downstream 1886307 73833643 ~ 73834606 (+)
G1109786 NA other downstream 1898919 73846255 ~ 73846794 (+)

Expression


Co-expression Network