G1105982


Basic Information

Item Value
gene id G1105982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71558430 ~ 71559232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257527
CCTTTTTAGAGGTGGGACGAATCTCTTGCAGAACCAGGAGAAAGAGCCTGTTGATCCAAGAAGAATGAGGGCCAGGGAGACAACCCCCTCTCCCTGGTTTCTTATACTTGTTTTTTAGCTGCCTTTTTGTGAGCAGTTTTAAAAGATGCACAAAAGGACTTGTCGGTAGGAACAATTTGAAGTGAAAGGATTACTTCTCAGCAACATTTTGTGATTTTTGTTTGATTAAAAGCCCACCTTTCAGTTTGTTTTAAAGAGACATTTAAGGAGAAAGGCTTACTGGTTTTTCTCCTCTATCTCACAGTGTGTTCTCTTACTggttcttctcctccatctcatAGTGTGTTCTCTTACTggttcttctcctccatctcatAGTGTGTTCTCTTACTggttcttctcctccatctcatAGTGTGTTCTCTTACTggttcttctcctccatctcacaGTGTGTTCTCTTACTggttcttctcctccatctcacaGTGTGTTCTCTTACTggttcttctcctccatctcacaGTGTGTTCTCTTACTGTGTCCTCTTTTAGCTCAACCAGTCCTTGGGATGTCGGTTAAAAAAGAGGACTAGAAGTATAAAGGTTGTATCCATACCAATTCACTCTGGTTTACTTAGCTCAACAATAGAAGGGGTGGGGTAGGGCTTTAGCTAGATGATGGCAAATAAGGATAGTCAGTGTTAGAATATTCTTAATATGACTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257527 True 729 lncRNA 0.41 2 71558430 71559232

Neighbor

gene id symbol gene type direction distance location
LOC110538230 rs11 coding upstream 43567 71511846 ~ 71514863 (+)
LOC118937918 NA coding upstream 43917 71514430 ~ 71514513 (+)
LOC118937915 NA coding upstream 45217 71513132 ~ 71513213 (+)
LOC118937916 NA coding upstream 45667 71512680 ~ 71512763 (+)
LOC110538227 LOC100380862 coding upstream 51585 71487656 ~ 71506845 (+)
lfng LOC106607332 coding downstream 1458 71560690 ~ 71568780 (+)
LOC110538233 LOC106607331 coding downstream 72363 71631595 ~ 71646397 (+)
trnaa-ugc-57 NA coding downstream 83976 71643208 ~ 71643282 (+)
mrm2 rrmj2 coding downstream 89361 71648593 ~ 71655726 (+)
psmg3 psmg3 coding downstream 382283 71941515 ~ 71942804 (+)
G1105980 NA non-coding upstream 1334 71556873 ~ 71557096 (+)
G1105976 NA non-coding upstream 8304 71549806 ~ 71550126 (+)
G1105943 NA non-coding upstream 137015 71421211 ~ 71421415 (+)
G1105941 NA non-coding upstream 149458 71408674 ~ 71408972 (+)
G1105865 NA non-coding upstream 212810 71282741 ~ 71345620 (+)
G1105987 NA non-coding downstream 14482 71573714 ~ 71577307 (+)
G1106049 NA non-coding downstream 135232 71694464 ~ 71694700 (+)
G1106146 NA non-coding downstream 285137 71844369 ~ 71844723 (+)
G1106195 NA non-coding downstream 370953 71930185 ~ 71968126 (+)
G1106205 LOC100194703 non-coding downstream 386495 71945727 ~ 71947336 (+)
G1105655 NA other upstream 652001 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 924459 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1187219 70370755 ~ 70371211 (+)
G1105357 NA other upstream 1231304 70324958 ~ 70327126 (+)
G1105281 NA other upstream 1363758 70162689 ~ 70194672 (+)
LOC110538241 LOC106607115 other downstream 458361 72016045 ~ 72019145 (+)
G1109505 NA other downstream 1746193 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1825576 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2274411 73833643 ~ 73834606 (+)

Expression


Co-expression Network