mrm2 (rrmj2)


Basic Information

Item Value
gene id mrm2
gene name rrmj2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71648593 ~ 71655726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624928.2
TTACGGTAACATCTTTAATTACGCATCCTCATATAATTTAACACgtttgaaaacaaaataattgCCACCCGTTATAACTTCTCCAAAATAAATCGATCTGCGCAGATTATGTGCATCATTGACGTTCTCGGACACATGAATTAGCTGCGTTCAATATAGCTCGCGCGGCGCACCGGGTTGGCGTGATTCTAATGTCGCCCTGCAGGACTCCCGGGAGAGCTAAATCGCGGATTCGGCTGTCTTTGACTAAATCGAGCGTGTCCAACAAACTCATGTGATCAGGAAGTGCAACTACAAAATCGAACGAAATGCTGTTTGCCAGCAGCATTAGCACATCGTTGCCATTACATTTAGCTAAATAATGTGGTACTCAGTGTTACAAAAATCATATCTACACACCTCTGTATATCTCCTAAAAAAGGCTGCGCATAATCTAAAAGGAAAGAGTACTGCTGATCAGCGCTGGATAGTTCGGCAGCTTAATGACCCCTTTGTGAAGGCTGCCCATGTGCACAACTACCGGTGTAGAAGCGCCTTCAAACTGCTGGAGATTGATGACAAATACACACTTTTAAAACCCGGTTTCAACGCAATAGATTGTGGTGCTGCACCGGGTGCTTGGAGCCAGCTCGCTGTTCACAGGGTCAACTCAACTGCGGCTAATGGAGAATTCCCCCGTGGCATTGTCGTTGGAATTGACCTTCTGCATATAGCACCTCTAGATGGAGCTCACTTCCTGTCCAATCATGACATCACCGACTCAGTCACACATGCCAAGCTGCTTGAACTTCTCCCTGGTGCCCAGGCTCATGTCATTATGAGTGATATGGCACCCAATGCCAGTGGTTTCAAGGAGATGGACCATGAAAAACTCATCACAATGTCATTGTCATTGATTGACTTGGCTGAGAAGGTGTTGCAGACCGGTGGCTCTCTGATTTGTAAGTATTGGGACGGGGCATTGGCGCACCAGCTTCAGCAGAAGCTTTCAGCTGTGTTCCGTGACGTCAGGACAGTCAAACCAAAAGCCAGCCGAAAGGAGTCGTCAGAGTTGTTTTTCCTTGCCCGGTCGTACAGAAAAAATAAAATAGTCTGACTGTA

Function

NR:

description
rRNA methyltransferase 2, mitochondrial-like

GO:

id name namespace
GO:0001510 RNA methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K02427 rlmE, rrmJ, ftsJ; 23S rRNA (uridine2552-2'-O)-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624928.2 True 1101 mRNA 0.46 2 71648593 71655726

Neighbor

gene id symbol gene type direction distance location
LOC110538233 LOC106607331 coding upstream 2196 71631595 ~ 71646397 (+)
trnaa-ugc-57 NA coding upstream 5311 71643208 ~ 71643282 (+)
lfng LOC106607332 coding upstream 79813 71560690 ~ 71568780 (+)
LOC110538230 rs11 coding upstream 133730 71511846 ~ 71514863 (+)
psmg3 psmg3 coding downstream 285789 71941515 ~ 71942804 (+)
tmem184a LOC106607336 coding downstream 292504 71948230 ~ 71965656 (+)
LOC110538240 LOC106607338 coding downstream 334153 71989879 ~ 72010860 (+)
LOC110538241 LOC106607115 coding downstream 360537 72016045 ~ 72019145 (+)
micall2a LOC106601118 coding downstream 366813 72022539 ~ 72037884 (+)
G1105987 NA non-coding upstream 71286 71573714 ~ 71577307 (+)
G1105982 NA non-coding upstream 89361 71558430 ~ 71559232 (+)
G1105980 NA non-coding upstream 91497 71556873 ~ 71557096 (+)
G1105976 NA non-coding upstream 98467 71549806 ~ 71550126 (+)
G1105943 NA non-coding upstream 227178 71421211 ~ 71421415 (+)
G1106049 NA non-coding downstream 38738 71694464 ~ 71694700 (+)
G1106146 NA non-coding downstream 188643 71844369 ~ 71844723 (+)
G1106195 NA non-coding downstream 274459 71930185 ~ 71968126 (+)
G1106205 LOC100194703 non-coding downstream 290001 71945727 ~ 71947336 (+)
G1105655 NA other upstream 742164 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 1014622 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1277382 70370755 ~ 70371211 (+)
G1105357 NA other upstream 1321467 70324958 ~ 70327126 (+)
G1105281 NA other upstream 1453921 70162689 ~ 70194672 (+)
G1109505 NA other downstream 1649699 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1729082 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2177917 73833643 ~ 73834606 (+)

Expression


Co-expression Network