G1105943


Basic Information

Item Value
gene id G1105943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71421211 ~ 71421415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257488
TGGGTGTGTATAGACTTATGTTGGATATGGCAAGCAAGTTCTGCCTTATATGCCTTATAGCTAGGCCACTTACCCATAATGTCATAGAGATCATCATCTCAATCAATAAGCAACAGCCTACAATTTACATTTCTGATCAAAGAATTCCAGCCTGTTTCTGTCATTCATATTTTAGTTAAACAGCCTGAAAGAGTCAGAGCCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257488 True 205 lncRNA 0.38 1 71421211 71421415

Neighbor

gene id symbol gene type direction distance location
LOC110538220 LOC106607322 coding upstream 36513 71381208 ~ 71384698 (+)
LOC110538218 LOC106601135 coding upstream 200776 71199101 ~ 71220435 (+)
LOC110538217 hop2 coding upstream 233426 71105931 ~ 71187785 (+)
LOC110538215 LOC106601138 coding upstream 238421 71167219 ~ 71182790 (+)
LOC110538213 LOC106601140 coding upstream 274029 71091294 ~ 71147182 (+)
LOC110538222 LOC106607324 coding downstream 1623 71423038 ~ 71431846 (+)
LOC110538226 gosr2 coding downstream 18589 71440004 ~ 71447266 (+)
LOC110538227 LOC100380862 coding downstream 66241 71487656 ~ 71506845 (+)
LOC110538230 rs11 coding downstream 90431 71511846 ~ 71514863 (+)
LOC118937916 NA coding downstream 91265 71512680 ~ 71512763 (+)
G1105941 NA non-coding upstream 12239 71408674 ~ 71408972 (+)
G1105865 NA non-coding upstream 75591 71282741 ~ 71345620 (+)
G1105888 NA non-coding upstream 88851 71324895 ~ 71332360 (+)
G1105838 NA non-coding upstream 187126 71233701 ~ 71234085 (+)
G1105803 NA non-coding upstream 222828 71192549 ~ 71198383 (+)
G1105976 NA non-coding downstream 128391 71549806 ~ 71550126 (+)
G1105980 NA non-coding downstream 135458 71556873 ~ 71557096 (+)
G1105982 NA non-coding downstream 137015 71558430 ~ 71559232 (+)
G1105987 NA non-coding downstream 152299 71573714 ~ 71577307 (+)
G1106049 NA non-coding downstream 273049 71694464 ~ 71694700 (+)
G1105655 NA other upstream 514782 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 787240 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1050000 70370755 ~ 70371211 (+)
G1105357 NA other upstream 1094085 70324958 ~ 70327126 (+)
G1105281 NA other upstream 1226539 70162689 ~ 70194672 (+)
psmg3 psmg3 other downstream 520136 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 596178 72016045 ~ 72019145 (+)
G1109505 NA other downstream 1884010 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1963393 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2412228 73833643 ~ 73834606 (+)

Expression


Co-expression Network