G1105941


Basic Information

Item Value
gene id G1105941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 71408674 ~ 71408972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1257486
ttacTATACACACAACTGTCATCTCTAATTAAAATGTATTTCCCCCTAAAACCTGACAACCAATCCAATTTCAATCTGGATGAGGGCAAAAAGAGGATTCCCAATCATGGGAGATTTTTCATGGCAGAGAAATATGGAGAATGTGCTAGAGATATATCTTGGGCtttcgagtggcgcagcggtctaaggcactgcatctcagtgctagaggcgtcactatagaccctggtttgattccaggctgtatcacaaccggccgtgattgggagtcccatagggcggtgcactattggcccagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1257486 True 299 lncRNA 0.46 1 71408674 71408972

Neighbor

gene id symbol gene type direction distance location
LOC110538220 LOC106607322 coding upstream 23976 71381208 ~ 71384698 (+)
LOC110538218 LOC106601135 coding upstream 188239 71199101 ~ 71220435 (+)
LOC110538217 hop2 coding upstream 220889 71105931 ~ 71187785 (+)
LOC110538215 LOC106601138 coding upstream 225884 71167219 ~ 71182790 (+)
LOC110538213 LOC106601140 coding upstream 261492 71091294 ~ 71147182 (+)
LOC110538222 LOC106607324 coding downstream 14066 71423038 ~ 71431846 (+)
LOC110538226 gosr2 coding downstream 31032 71440004 ~ 71447266 (+)
LOC110538227 LOC100380862 coding downstream 78684 71487656 ~ 71506845 (+)
LOC110538230 rs11 coding downstream 102874 71511846 ~ 71514863 (+)
LOC118937916 NA coding downstream 103708 71512680 ~ 71512763 (+)
G1105865 NA non-coding upstream 63054 71282741 ~ 71345620 (+)
G1105888 NA non-coding upstream 76314 71324895 ~ 71332360 (+)
G1105838 NA non-coding upstream 174589 71233701 ~ 71234085 (+)
G1105803 NA non-coding upstream 210291 71192549 ~ 71198383 (+)
G1105943 NA non-coding downstream 12239 71421211 ~ 71421415 (+)
G1105976 NA non-coding downstream 140834 71549806 ~ 71550126 (+)
G1105980 NA non-coding downstream 147901 71556873 ~ 71557096 (+)
G1105982 NA non-coding downstream 149458 71558430 ~ 71559232 (+)
G1105987 NA non-coding downstream 164742 71573714 ~ 71577307 (+)
G1105655 NA other upstream 502245 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 774703 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1037463 70370755 ~ 70371211 (+)
G1105357 NA other upstream 1081548 70324958 ~ 70327126 (+)
G1105281 NA other upstream 1214002 70162689 ~ 70194672 (+)
psmg3 psmg3 other downstream 532579 71941515 ~ 71942804 (+)
LOC110538241 LOC106607115 other downstream 608621 72016045 ~ 72019145 (+)
G1109505 NA other downstream 1896453 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1975836 73384755 ~ 73386199 (+)
G1109778 NA other downstream 2424671 73833643 ~ 73834606 (+)

Expression


Co-expression Network