G1110989


Basic Information

Item Value
gene id G1110989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74832139 ~ 74836922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1263147
TCTATCAGACACATAATAACACTGAAATGGCTTCTAATGAGCAACTTACAGCTGCTCAGAAACAGCTTCTCAGGAAAAGACAAGATCTCGACTTTTGGAAGAAAAACGCGCTAAAAATACGTAGTCGCAACCGCATAGCTGGACTAGCTATCGGGGCGTTTGTCATCGGCATGTTCAGCTACACCATCCTCTCAGTGAAGCAGGAGAGGATCATGGAGGACATTGATAACGAGGCAAAGATCAATTACATCAGAGGTCCCAGGACCAACTCTTAGGGATGTTCCCAGCTCCCTCACCTGCACAGGAACAGTGGAAGCTGAGCTCACTCGGGACTGGACTGTCAATCTGCCATACGCAACTGTGGCCAAAATATACACACTTGTTTTTGAAAGGTGGAGGCGCTTATCAGTTTCTGTTATTTCAATATGCATTGTAGAGATAGATGTAACCATGCACATGATCTAGACCTGGATACCCTGCAAACTGGTTtctgaatataatataacttGTTATATAATAAGAGGTTGTTTAAGAATATTACATGGTTTGTGTATTGTGTAACTAATTGGCCTCGTAATATAGGAGAAAGCTTACGTGTTGGGCTATTCCATGATATTCGGATGTTGTTATACAATGAAATAAAACGTAAAGCTGC

Function

NR:

description
cytochrome c oxidase assembly factor 3 homolog, mitochondrial-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1263147 True 655 lncRNA 0.42 2 74832139 74836922

Neighbor

gene id symbol gene type direction distance location
LOC110538397 LOC106607181 coding upstream 145 74792413 ~ 74831994 (+)
LOC110538398 LOC106607185 coding upstream 47554 74776771 ~ 74784585 (+)
LOC110538400 NA coding upstream 55614 74770005 ~ 74776525 (+)
LOC110538402 LOC106601265 coding upstream 70379 74730534 ~ 74761760 (+)
LOC110538406 LOC106607190 coding upstream 192650 74637224 ~ 74639489 (+)
LOC110538393 LOC106601259 coding downstream 93940 74930862 ~ 74933801 (+)
LOC110538391 LOC106601294 coding downstream 104397 74941319 ~ 74942346 (+)
LOC110538388 LOC106601254 coding downstream 123115 74960037 ~ 75102995 (+)
LOC110538390 LOC106578813 coding downstream 201420 75038342 ~ 75048707 (+)
LOC110538386 LOC106607176 coding downstream 299339 75136261 ~ 75216446 (+)
G1110987 rpl23 non-coding upstream 45552 74784815 ~ 74786587 (+)
G1110993 NA non-coding upstream 65245 74765517 ~ 74766894 (+)
G1111002 LOC106604990 non-coding upstream 106438 74725298 ~ 74725701 (+)
G1111001 NA non-coding upstream 108237 74723602 ~ 74723902 (+)
G1110998 NA non-coding upstream 112867 74718989 ~ 74719272 (+)
G1111035 NA non-coding downstream 1781 74838703 ~ 74840368 (+)
G1111036 NA non-coding downstream 4370 74841292 ~ 74841617 (+)
G1111037 LOC106601258 non-coding downstream 4876 74841798 ~ 74842395 (+)
G1111038 LOC106601258 non-coding downstream 6290 74843212 ~ 74844083 (+)
G1111041 NA non-coding downstream 11140 74848062 ~ 74848291 (+)
G1109786 NA other upstream 985345 73846255 ~ 73846794 (+)
G1109778 NA other upstream 997533 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1446272 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1525985 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2813849 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 123344 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 581867 75418789 ~ 75423163 (+)
G1111961 NA other downstream 908217 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 913948 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 947428 75774976 ~ 75790602 (+)

Expression


Co-expression Network