XLOC_029939



Basic Information


Item Value
gene id XLOC_029939
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 14965817 ~ 14966350 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061413
ttttttacattttgtaaaggcaaaatcaaaacaaaaatggcagagaaacgtcAATGCAATGATTCTTTAGAGGCGAAGAAAAGCCAAGAAAAGATAAGACAAAGCCTATctaaatacacataaacacacacatacagtaaatataaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacggcacatatatgtgtgtgcgtgcgtgtgtatttttatggtgggggggctccaatgtttgtatttgttcatggggggggccccagagaaaaaggttgggaaccactgccctagagctacagagaaatactgggaaatctgtGGATTGATGGCtattacaatgttattattgtaaatcatattattattaataaattgctgttataataataataataataattattattattattattattattattattattataaaataacaaataaataaatacaaataaataaatacataaatacatttcctAATTgcttaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061413 True 534 lncRNA 0.25 1 14965817 14966350

Neighbor


gene id symbol gene type direction distance location
XLOC_029938 BX927201.1 coding upstream 323548 14642152 ~ 14642269 (+)
XLOC_029937 NA coding upstream 635799 14327332 ~ 14330018 (+)
XLOC_029936 NA coding upstream 844084 14098342 ~ 14121733 (+)
XLOC_029935 hk2 coding upstream 961611 13870340 ~ 14004206 (+)
XLOC_029934 NA coding upstream 1289790 13665818 ~ 13676027 (+)
XLOC_029940 tbx1 coding downstream 236145 15202495 ~ 15215483 (+)
XLOC_029941 NA coding downstream 338785 15305135 ~ 15307475 (+)
XLOC_029942 pebp1 coding downstream 384604 15350954 ~ 15357819 (+)
XLOC_029943 suds3 coding downstream 529001 15495351 ~ 15513778 (+)
XLOC_029944 srrm4 coding downstream 701524 15667874 ~ 15817204 (+)
XLOC_029932 NA non-coding upstream 1349521 13603229 ~ 13616296 (+)
XLOC_029945 BX649391.2 non-coding downstream 776787 15743137 ~ 15743253 (+)
XLOC_029947 NA non-coding downstream 954574 15920924 ~ 15923469 (+)
XLOC_029948 NA non-coding downstream 1019447 15985797 ~ 15986751 (+)
XLOC_029950 NA non-coding downstream 1386885 16353235 ~ 16360031 (+)

Expression



Co-expression Network