XLOC_029948


Basic Information

Item Value
gene id XLOC_029948
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 15985797 ~ 15986751 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061418
acgatctctgtcagACATTCACCCCAACcaactccccatcattctccttctcttttcagatgggaaaatgggccaaaccaaaggttaccatgggccaactttggttgCAACAATGCAGATGGAGTGAAGCTGTCCTCCTCATCCTCCAAGCGGGTCTGATGACATCATCAGCTGAGAGCTGATCTGCAAGTAATTGTCATGCTGTGGGCGAAAACAGCCTTTTTAACATTCTGAAAGCTCTTTCGGGTTTTCCTGTGTTGAATCAGAACACATGTTGGCCATTTTGGGATCCGCTGTTTCTTTCCGATGCATTCCTGACCTTGAGGAGCGGTGCAGTTGGTTTTCATAAAGCGGACGTCTTCAAAAAGACTCTGGAGCCACTCACATTTTGAATATCTTGGGATGTTATTGCATGAAATTTGTACTCTTTAGTTGTCTGAATTTTGTGCCAACGTTGGTCAAGCAAAGTGCAAGGCAGTTTTGGTAGACaattatgtgtatgtttgtgcaggaagtacataaaaaatatgtttaatgtttaatgt

Function

GO:

id name namespace
GO:0045446 endothelial cell differentiation biological_process
GO:2000826 regulation of heart morphogenesis biological_process
GO:0006508 proteolysis biological_process
GO:0033334 fin morphogenesis biological_process
GO:0005576 extracellular region cellular_component
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061418 True 545 lncRNA 0.43 2 15985797 15986751

Neighbor

gene id symbol gene type direction distance location
XLOC_029947 NA coding upstream 62328 15920924 ~ 15923469 (+)
XLOC_029946 hspb8 coding upstream 145312 15819651 ~ 15840485 (+)
XLOC_029944 srrm4 coding upstream 168593 15667874 ~ 15817204 (+)
XLOC_029945 BX649391.2 coding upstream 242544 15743137 ~ 15743253 (+)
XLOC_029943 suds3 coding upstream 472019 15495351 ~ 15513778 (+)
XLOC_029949 znrf3 coding downstream 5904 15992655 ~ 16126906 (+)
XLOC_029950 NA coding downstream 366484 16353235 ~ 16360031 (+)
XLOC_029951 htr7c coding downstream 509522 16496273 ~ 16581486 (+)
XLOC_029952 CR759970.2 coding downstream 1042547 17029298 ~ 17029414 (+)
XLOC_029953 NA coding downstream 1065055 17051806 ~ 17069438 (+)
XLOC_029941 NA non-coding upstream 678322 15305135 ~ 15307475 (+)
XLOC_029939 NA non-coding upstream 1019447 14965817 ~ 14966350 (+)
XLOC_029938 BX927201.1 non-coding upstream 1343528 14642152 ~ 14642269 (+)
XLOC_029954 NA non-coding downstream 1067565 17054316 ~ 17056958 (+)
XLOC_029955 NA non-coding downstream 1322981 17309732 ~ 17542616 (+)

Expression


Co-expression Network