XLOC_029968 (atp8b5a)


Basic Information

Item Value
gene id XLOC_029968
gene name atp8b5a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 19261391 ~ 19296249 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058674
ATGTCATTCTTTGGCTTAGACTGTGCGAGGAAGAAAGAGAAAGAGGTGGAGAGAAAAATCAGAGCAAACGACAGAGAATATAATTCATCCTTCAAATATGCAACCAATTGCATCAAGACCTCCAAATACAACCCCTTCTCTTTTCTGCCTCTCAACTTGTTTGAGCAGTTCCAGAGGATCGCCAATGCTTATTTCCTCTTCCTGCTCATTCTGCAGGTTATTCCTGCTATTTCTTCTCTGTCTTGGTTCACCACTGTCGTCCCGCTAGTGTTAGTATTATCGGTGACTGCAGCCAAAGATGCCATTGATGATATTaatCGCCACAGAAGTGACAGGCAGGTCAATAACCGGAAGGTCAATGTGCTCATCAGTGGAAAACTGACAAGTGAGAAGTGGATGAATGTGCAAGTGGGAGACATTATCAAGTTGGAGAACAACCAGTTTGTCACAGCAGATTTGCTCCTGTTGTCTAGCAGTGAACCTCTCAACCTGGTTTACATTGAAACTGCAGAGCTTGATGGGGAAACTAACCTGAAGGTTAAACAGTCTCTGACTGTAACAGGAGACATGGGGCACAATTTGGAGGCTTTGGCTGCATTCAACGGCGAGGTGTGTTGTGAGCCTCCTAACAACCGCCTGGATCGCTTTACGGGCACACTGACGTTTGACACGCAGAAATACTCACTGGACAATGAGCGGGTCCTGCTGAGGGGCTGCACTCTCAGAAACACAGACTGGTGTTTTGGCCTGGTGCTGTTTGCAGGCCCAGAAACCAAGCTGATGCAAAACTGTGGAAAAAGCACCTTTAAGAGGACGAGTATTGATCGACTCATGAATGTGTTGGTGCTTTTTATTTTTGCACTTCTAGCACTGATGTGTATCATTCTGGCCGTGGGACATGGGATTTGGGAAAACTACACAGGGTCAAAGTTCAATGTCTTTCTTCCACATGAAGAGAACGCAGCCTTTTCAGCCTTTCTCACTTTCTGGTCGTACATTATAATCCTCAACACTGTGGTGCCCATCTCACTttatgtcagTATGGAAGTGATTCGGTTAGGCAACAGTTACTACATCAACTGGGACAGGAACATGTATCACACCAGAACTGACactccagctgaggctcgaaccacaACACTCAACGAAGAGCTCGGTCAGATCAAATACATCTTCTCAGACAAAACTGGCACGCTCACCCAGAACATCATGACCTTCAACAAATGCTCCATCAACGGGAAATCTTACGGAGATGTTTTCCAGCACTACAGTGGACAGACGCTGGAGATCACAGAGGAAACGACACCAGTGGACTTTTCCTTCAACGGACTTGCAGATCCAAAGTTTCTCTTTTATGATCACAGCCTGGTAGAGGCGGTAAAGCTGGAGCTTCCAGAAGTTCATGCTTTCTTCAGACTACTCGCTCTCTGTCACACTTGCATGGCAGAGGAGAAGAAGGAGGGTCATCTAGTGTACCAGGCCCAATCTCCTGATGAGGGTGCCTTGGTCACGGCCGCGCGTAATTTCGGTTTTGTGTTCCGCTCTCGCAGTCCTGAGACGATTACAATAGAAGAGATGGGCATTCAGAGGACCTATGAGCTGCTAGCCATCCTGGACTTTAACAATGTGCGGAAACGGATGTCTGTGATTGTCCGTAATCCGGAGGGCAAACTCTCTCTGTACTGTAAAGGAGCAGACACCATCATCTACGAAAGACTACATCCTTCCTGTAGCAAACTGATGGAGGTCACCACTGAGCACCTCAATGAGTTTGCTGGAGAAGGTTTGAGGACTCTTGTTCTAGCGTATAAGGATTTGGATGAAGACTATTTTGCAGAGTGGAAACAGCGCCATCATGAGTCCAGTGTGGCAATGGAGGACAGAGAGGAGAAACTGGACAAAGTGTATGAGGAGATAGAGAAAGACATGATGttaaTTGGGGCCACGGCCATTGAGGATAAACTTCAAGATGGAGTCGCTCTTACCATTGAGCTGCTGGCGAAAGCAGAAATCAAAATCTGGGTGCTCACCGGGGACAAGCAAGAGACCGCTGAGAACATTGGCTACTCCTGTAACCTGCTGAGGGAGGAGATGAACGACGTGTTTATTGTTGCAGCACATTCACCTGAGGAGGTCAGACAGGAGCTGAGgGATGCCCGTCTAAAGATGCAGCCTTCTACTGAACAAGATAAATTTCTTATCCCTGAGGTTATCCTGGGTAATACTCCTAAAGTGGTTCAGGATGAACATGTGAACGGAGAATATGGACTGGTGATAAACGGACACAGTCTGGCGTTCGCTCTGGAGAGCAGCATGGAGCTGGAGTTTCTGCGGACAGCATGTATGTGTAAGACGGTGATCTGCTGTCGGGTAACTCCTCTACAGAAAGCTCAGGTCGTGGAGCTCGTCAAGAGATATAAGAAAGCTGTCACTCTGGCCATAGGAGATGGAGCTAATGATGTTAGCATGATTAAAGCGGCTCATATTGGTGTGGGTATCAGCGGTCAGGAAGGGATGCAGGCTGTGCTGTCCAGTGACTTCTCCTTCGCTCAGTTCCGCTTCCTGCAGCGCCTCCTACTGGTTCATGGACGCTGGTCATACCTGCGCATGTGCAAGTTTCTGCGCTACTTCTTCTATAAGAACTTCACCTTTACCTTTGTGCACTTCTGGTATGCATTTTTTTGCGGCTTTTCTGCTCAGACGGTTTATGATGAAGGCTTCATCACTTTGTATAATTTGGTATACACTGCTCTTCCTGTTCTGGGAATGAGTCTGTTTGACCAGGATGTGAATGCTAACTGGAGTCTGGAGTTCCCTCAGCTGTACGTGCCGGGTCAGTTGAGTCAGTACTTCAGTAAGCGTGCCTTCATGATGTGTGCGCTTCACAGCTGCTACAGTTCTCTAGTGCTGTTCTTTGTGCCTTACGCCACTACATATGACACCGCGAGAGCCGACGGCAGAGATGGAGCAGACTATCAGTCATTCGCACTCATTACTCAAACCTGCCTCACCGTCACTGTTTGTGTGCAGTTGGGGCTGGACCTCTCGTACTGGACTGTGGTCAACCATCTGTTCGTTTGGGGAAGTTTgggaatgtttttctttttgaccTTCACCATGTATACTGATGGACTTTTCAAGTTACGTCCAGCTTCTTTTGCTTTCATAGGAACTGCCCGAAATTGTCTTAACCAGCCCAATGTGTGGCTGACCGTGGCATTGACAGCTTTACTATGTGTCTTGCCTGTGGTTGCGTACCGGTTCATCTACTGCCAGATCTATCCTACCATTAATGACAAGGTGAGGTATAAGATGCGTCAGATGAAGGAGCCGGCTCCTCGGCCACGTCCGCGGCTGACCCGCAGGAGCACACGCCGTTCTGGTTACGCCTTCTCTCATGCCCAAGGCTACGGGGACCTTGTGACATCTCGCAGATTCCTCCGGCGACCCGCGCCCGCTCGCTCCGCAGGCTTCACTCCAGCTGGACGCTCTCCTGGGTTCAAGCCCACGGGTCGATCCGCAGGGTACAGCCCGGTCGGGAGAGAACAGAACCCTAAACAAAAAGTTGAACCCACGTCACTGCAGATGTTTCGCGCTGTTAAAGACGCTTCTTTCTGA
>TCONS_00058675
AGGTGGAGAGAAAAATCAGAGCAAACGACAGAGAATATAATTCATCCTTCAAATATGCAACCAATTGCATCAAGACCTCCAAATACAACCCCTTCTCTTTTCTGCCTCTCAACTTGTTTGAGCAGTTCCAGAGGATCGCCAATGCTTATTTCCTCTTCCTGCTCATTCTGCAGGTTATTCCTGCTATTTCTTCTCTGTCTTGGTTCACCACTGTCGTCCCGCTAGTGTTAGTATTATCGGTGACTGCAGCCAAAGATGCCATTGATGATATTaatCGCCACAGAAGTGACAGGCAGGTCAATAACCGGAAGGTCAATGTGCTCATCAGTGGAAAACTGACAAGTGAGAAGTGGATGAATGTGCAAGTGGGAGACATTATCAAGTTGGAGAACAACCAGTTTGCAGATTTGCTCCTGTTGTCTAGCAGTGAACCTCTCAACCTGGTTTACATTGAAACTGCAGAGCTTGATGGGGAAACTAACCTGAAGGTTAAACAGTCTCTGACTGTAACAGGAGACATGGGGCACAATTTGGAGGCTTTGGCTGCATTCAACGGCGAGGTGTGTTGTGAGCCTCCTAACAACCGCCTGGATCGCTTTACGGGCACACTGACGTTTGACACGCAGAAATACTCACTGGACAATGAGCGGGTCCTGCTGAGGGGCTGCACTCTCAGAAACACAGACTGGTGTTTTGGCCTGGTGCTGTTTGCAGGCCCAGAAACCAAGCTGATGCAAAACTGTGGAAAAAGCACCTTTAAGAGGACGAGTATTGATCGACTCATGAATGTGTTGGTGCTTTTTATTTTTGCACTTCTAGCACTGATGTGTATCATTCTGGCCGTGGGACATGGGATTTGGGAAAACTACACAGGGTCAAAGTTCAATGTCTTTCTTCCACATGAAGAGAACGCAGCCTTTTCAGCCTTTCTCACTTTCTGGTCGTACATTATAATCCTCAACACTGTGGTGCCCATCTCACTttatgtcagTATGGAAGTGATTCGGTTAGGCAACAGTTACTACATCAACTGGGACAGGAACATGTATCACACCAGAACTGACactccagctgaggctcgaaccacaACACTCAACGAAGAGCTCGGTCAGATCAAATACATCTTCTCAGACAAAACTGGCACGCTCACCCAGAACATCATGACCTTCAACAAATGCTCCATCAACGGGAAATCTTACGGTCTGGACCAATATCactttttttccatatttatatGCCTATGTTATTTCAAACAAGATATAAATCTGACATTAAGAGACTATTTGAAGTTAAAAGTATGTCTTCTCTGCCCTACAGGAGATGTTTTCCAGCACTACAGTGGACAGACGCTGGAGATCACAGAGGAAACGACACCAGTGGACTTTTCCTTCAACGGACTTGCAGATCCAAAGTTTCTCTTTTATGATCACAGCCTGGTAGAGGCGGTAAAGCTGGAGCTTCCAGAAGTTCATGCTTTCTTCAGACTACTCGCTCTCTGTCACACTTGCATGGCAGAGGAGAAGAAGGAGGGTCATCTAGTGTACCAGGCCCAATCTCCTGATGAGGGTGCCTTGGTCACGGCCGCGCGTAATTTCGGTTTTGTGTTCCGCTCTCGCAGTCCTGAGACGATTACAATAGAAGAGATGGGCATTCAGAGGACCTATGAGCTGCTAGCCATCCTGGACTTTAACAATGTGCGGAAACGGATGTCTGTGATTGTCCGTAATCCGGAGGGCAAACTCTCTCTGTACTGTAAAGGAGCAGACACCATCATCTACGAAAGACTACATCCTTCCTGTAGCAAACTGATGGAGGTCACCACTGAGCACCTCAATGAGTTTGCTGGAGAAGGTTTGAGGACTCTTGTTCTAGCGTATAAGGATTTGGATGAAGACTATTTTGCAGAGTGGAAACAGCGCCATCATGAGTCCAGTGTGGCAATGGAGGACAGAGAGGAGAAACTGGACAAAGTGTATGAGGAGATAGAGAAAGACATGATGttaaTTGGGGCCACGGCCATTGAGGATAAACTTCAAGATGGAGTCGCTCTTACCATTGAGCTGCTGGCGAAAGCAGAAATCAAAATCTGGGTGCTCACCGGGGACAAGCAAGAGACCGCTGAGAACATTGGCTACTCCTGTAACCTGCTGAGGGAGGAGATGAACGACGTGTTTATTGTTGCAGCACATTCACCTGAGGAGGTCAGACAGGAGCTGAGgGATGCCCGTCTAAAGATGCAGCCTTCTACTGAACAAGATAAATTTCTTATCCCTGAGGTTATCCTGGGTAATACTCCTAAAGTGGTTCAGGATGAACATGTGAACGGAGAATATGGACTGGTGATAAACGGACACAGTCTGGCGTTCGCTCTGGAGAGCAGCATGGAGCTGGAGTTTCTGCGGACAGCATGTATGTGTAAGACGGTGATCTGCTGTCGGGTAACTCCTCTACAGAAAGCTCAGGTCGTGGAGCTCGTCAAGAGATATAAGAAAGCTGTCACTCTGGCCATAGGAGATGGAGCTAATGATGTTAGCATGATTAAAGCGGCTCATATTGGTGTGGGTATCAGCGGTCAGGAAGGGATGCAGGCTGTGCTGTCCAGTGACTTCTCCTTCGCTCAGTTCCGCTTCCTGCAGCGCCTCCTACTGGTTCATGGACGCTGGTCATACCTGCGCATGTGCAAGTTTCTGCGCTACTTCTTCTATAAGAACTTCACCTTTACCTTTGTGCACTTCTGGTATGCATTTTTTTGCGGCTTTTCTGCTCAGACGGTTTATGATGAAGGCTTCATCACTTTGTATAATTTGGTATACACTGCTCTTCCTGTTCTGGGAATGAGTCTGTTTGACCAGGATGTGAATGCTAACTGGAGTCTGGAGTTCCCTCAGCTGTACGTGCCGGGTCAGTTGAGTCAGTACTTCAGTAAGCGTGCCTTCATGATGTGTGCGCTTCACAGCTGCTACAGTTCTCTAGTGCTGTTCTTTGTGCCTTACGCCACTACATATGACACCGCGAGAGCCGACGGCAGAGATGGAGCAGACTATCAGTCATTCGCACTCATTACTCAAACCTGCCTCACCGTCACTGTTTGTGTGCAGTTGGGGCTGGACCTCTCGTACTGGACTGTGGTCAACCATCTGTTCGTTTGGGGAAGTTTgggaatgtttttctttttgaccTTCACCATGTATACTGATGGACTTTTCAAGTTACGTCCAGCTTCTTTTGCTTTCATAGGAACTGCCCGAAATTGTCTTAACCAGCCCAATGTGTGGCTGACCGTGGCATTGACAGCTTTACTATGTGTCTTGCCTGTGGTTGCGTACCGGTTCATCTACTGCCAGATCTATCCTACCATTAATGACAAGGTGAGGTATAAGATGCGTCAGATGAAGGAGCCGGCTCCTCGGCCACGTCCGCGGCTGACCCGCAGGAGCACACGCCGTTCTGGTTACGCCTTCTCTCATGCCCAAGGCTACGGGGACCTTGTGACATCTCGCAGATTCCTCCGGCGACCCGCGCCCGCTCGCTCCGCAGGCTTCACTCCAGCTGGACGCTCTCCTGGGTTCAAGCCCACGGGTCGATCCGCAGGGTACAGCCCGGTCGGGAGAGAACAGAACCCTAAACAAAAAGTTGAACCCACGTCACTGCAGATGTTTCGCGCTGTTAAAGACGCTTCTTTCTGA

Function

symbol description
atp8b5a Predicted to enable ATPase-coupled intramembrane lipid transporter activity. Predicted to be involved in Golgi organization and phospholipid translocation. Predicted to act upstream of or within phospholipid transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and trans-Golgi network. Orthologous to human ATP8B5P (ATPase phospholipid transporting 8B5, pseudogene).

GO:

id name namespace
GO:0007030 Golgi organization biological_process
GO:0015914 phospholipid transport biological_process
GO:0045332 phospholipid translocation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0005802 trans-Golgi network cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060531-48 Predicted to enable ATPase-coupled intramembrane lipid transporter activity. Predicted to be involved in Golgi organization and phospholipid translocation. Predicted to act upstream of or within phospholipid transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and trans-Golgi network. Orthologous to human ATP8B5P (ATPase phospholipid transporting 8B5, pseudogene).

Ensembl:

ensembl_id ENSDARG00000062040

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058674 False 3618 mRNA 0.49 27 19261391 19296249
TCONS_00058675 True 3686 mRNA 0.48 25 19261687 19296249

Neighbor

gene id symbol gene type direction distance location
XLOC_029967 unc13ba coding upstream 23691 19094153 ~ 19237700 (+)
XLOC_029966 NA coding upstream 181475 19068184 ~ 19079916 (+)
XLOC_029963 NA coding upstream 223807 18822811 ~ 19037584 (+)
XLOC_029965 pgam5 coding upstream 325156 18925367 ~ 18936235 (+)
XLOC_029964 NA coding upstream 434626 18824394 ~ 18826765 (+)
XLOC_029969 rusc2 coding downstream 13628 19309877 ~ 19331482 (+)
XLOC_029970 acacb coding downstream 40859 19337108 ~ 19383694 (+)
XLOC_029971 NA coding downstream 104150 19400399 ~ 19403378 (+)
XLOC_029972 NA coding downstream 108283 19404532 ~ 19405938 (+)
XLOC_029973 myo1ha coding downstream 117589 19413838 ~ 19435983 (+)
XLOC_029962 NA non-coding upstream 451178 18808714 ~ 18810213 (+)
XLOC_029961 NA non-coding upstream 458057 18802187 ~ 18803334 (+)
XLOC_029980 NA non-coding downstream 665546 19961795 ~ 19965283 (+)
XLOC_029982 BX547941.1 non-coding downstream 781445 20077694 ~ 20077810 (+)
XLOC_029992 NA non-coding downstream 1246651 20542900 ~ 20546489 (+)

Expression


Co-expression Network