XLOC_003013 (taar18d)


Basic Information

Item Value
gene id XLOC_003013
gene name taar18d
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40531129 ~ 40532157 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005529
aacaaactcctaACAGGAGAAGACTCACTCATGGCCTACGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTGACATCAACTCATCATGTGTCAAGGAACAACGCTCCATTCAGGAATATATCatcatgtatgtgtttttttcattgctgtcagcatggactgtgtttctgaacctgctggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTCTCTGGCGATGGCTGATCTGTTTACTGGACTTACTGTGATGCCTGTGGAAGCCATCAAACTGATTGAGACGTGTTGGTATTTTGGAGAGAAATTCTGTGATATATTTATGATTATTGTGGGACTGTTTGGCTCAACTTCCTTTAGtaatatagttttaatttctGTTGACCGTTACCTGGCTGTGTGTCACCCTTTAATCTACCCGCACAAATTTACTAGATCAAAAGCTTTAATAAGTATCTGCGTGTGCTGGCTTTTTGCCTTAATCTACAACCTTGGTTTTCTTTTAACTGGCAAATATTTTCAAAGTTCAGAAAGAACAGACATGTGTTATGGAAAATGCAATTTGGTAATAATAAGTTCTTCATGGGCATTTACTGACCTTTTCGTTTCCTTCTTGTTGCCTTGTACCCTGATTCTGATTTTATATTTGAGAATATTTTATGTTGCTCAACAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGGTGGTAAATGTGTGAAGGAAGGTTTAGTAAAGAGGAAATCTGAGAATAAAGCTGCTTTCACATTAGGGATTGTTGTGACTGTCTATCTGCTTTGCTTTATTCCATACTATATATTGTCTGTAACTGGGGTCTGTTCTGCCACAATGACATATCTGTTGTGGACTTTGTATGTTAATTGTGGTCTGAATCCTCTTATCTATGCTTTATTTTATCGCTGGTTTAAAATATCTGTCAAACACAtcttaactttaaaaatattgCAGCCAGCATCCTCACTCTTGGACATTTTTACAGAT

Function

symbol description
taar18d Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060413-12 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000054252

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005529 True 1029 mRNA 0.38 1 40531129 40532157

Neighbor

gene id symbol gene type direction distance location
XLOC_003012 taar18g coding downstream 2870 40527243 ~ 40528259 (-)
XLOC_003011 taar18a coding downstream 6388 40523707 ~ 40524741 (-)
XLOC_003010 CR396590.6 coding downstream 10029 40520823 ~ 40521100 (-)
XLOC_003009 BX530037.3 coding downstream 13531 40516749 ~ 40517598 (-)
XLOC_003008 taar19k coding downstream 16486 40513612 ~ 40514643 (-)
XLOC_003014 taar18e coding upstream 3820 40535977 ~ 40536990 (-)
XLOC_003015 CR396590.4 coding upstream 5283 40537440 ~ 40538047 (-)
XLOC_003016 taar18f coding upstream 10753 40542910 ~ 40543923 (-)
XLOC_003017 taar18c coding upstream 19881 40552038 ~ 40553090 (-)
XLOC_003018 taar18b coding upstream 24046 40556203 ~ 40557210 (-)
XLOC_003005 NA non-coding downstream 31920 40498159 ~ 40499209 (-)
XLOC_003004 NA non-coding downstream 40492 40489637 ~ 40490637 (-)
XLOC_003000 BX530037.2 non-coding downstream 61735 40468372 ~ 40469394 (-)
XLOC_003023 NA non-coding upstream 88824 40620981 ~ 40621955 (-)
XLOC_003024 BX001050.1 non-coding upstream 209173 40741330 ~ 40741447 (-)
XLOC_003028 NA non-coding upstream 318980 40851137 ~ 40857097 (-)
XLOC_003029 CU929265.1 non-coding upstream 370964 40903121 ~ 40903237 (-)

Expression


Co-expression Network