LOC110539043 (LOC106601829)


Basic Information

Item Value
gene id LOC110539043
gene name LOC106601829
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56125290 ~ 56203810 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941587.1
TGTCCACTGTACACGGTCACCTTTCATAGCACTAATGAATGACGTCGAACAATAACACCCTGCCCGCCTACCTTTCCCACCAACCGACTCACTGTTAATCGAAGCAGAAGTTTGACAGCTCAGCTTTTACCCCAGGCCGTCCTTTGAGAACGTACGGTTGCACTTCACTTTTGCCTTCGGAAGAAATTGTCACTCCCTTTTTCATGATCGACTACTGTAGAAGGGAAAGACAGGTAAATAGGATCTTTCTCGGCAGTCTATATGGAGCGCGCCATGTTATGAAGAATTCGATGAGTCGATAGTGTCACATTTATTCTGTCTGGGGAGTTTATTCTGGACATTTGTATTGTTTTTAACGGGCGTGAATAGGGATATAACCATGTCGAGGGACCCTGAAGAAGTGAACAAGCTCACCGAAAGTACATACAAGaaTGTAATGGAACAGTTCAACCCTGGGCTCAGGAACCTGGTCAACCTGGGGAAGAGCTATGAGAAATCAGTGGCAGCGATGAGCCTGGCTGGAAAGGTGTACTTTGATGCGGTCTCTAAGATCGGAGAGAATGCTGcggtctctcctgtctccagggaGTTGGGCGTTGTGCTGATGGAGATATCCGAGGTCCACAGGAAAGTTCACCTTGAGCTAGAGGAGAATTTTAAGAGGTTTCACAGCGAGATAATAGCTGAAttggagaggaagacagacatgGATGTAAAATACATGAcaGCCACCTTTAAGAGGTACCAGACCGAGCACAAGATGAAGCAGGACTCTCTGGAGAGGTCGCAGTCTGACCTGAAGAAACTCAGGAGGAAGAGCCAGGGCAAGAACACCAACAAGTACGAAAACAAGGAGAGTGAGTGCCTGGAGACGCTGAGGTCAGGGCAGATGGACATGCAGAAGTTCATCGCCGACGGCTGCAAGGAGGCTCTGCTGGAGGAGAAGAGACGCTTCTGCTTCCTGGTGGACAAACACTGCACCTTCTCCTATCAGATCGCTGCCTTCCACGACAAGGCCAGAGACATGCTTTTCGGGAAGCTGCCCACCTGGCAGGACAAGTGTGGCGATGCCACCAACGTGCCCGAGAGCGTGATGTCTATGATTGAGGGTCTTCGCACCCCAGTGTCCATCACCCCCCAGGCCTCCCCCATGTCCCAGAGACACAGTAGGAGCAACTCCATATTCCGGGACACAGTTCCACCCCCTGCCCCGGCACTGAAGGCTCAGACCAGCCCATTGGCCAGTATGTTCACGCAGGACACACCCACAACAAACTCAGTCACCAGAGAGACTGAGAGTGgcacagactacAGGGAcaatggaggggaggagagtggcgGTCTAGGTCCCAGGTCAGTGTCTGTGGCCACAGGACTCAACAACATTGTGAAGAGACCCAGGGTCCGCACCATCTTCCCCCACACCTCTGGGACCAACTCTACGCTGCTCAGCTTTGACGAGGGAGACATCATCACCCTGCTCATACCTGACGAGAGGGACGGATGGCTCTACGGAGAACTGGAGAAAACCAGACAGAGGGGATGGTTTCCATCATCCTATTGCCGGGCATATTCAGAGCCAATAGTGAATAACAACAGtgtgGGGGCTCCTCCCATGCGCAGTAAGAGCGTGGTGAACCTGCTCCAccaggacacagagacagatgatTCCTCCATGATCCTCCCCCCTCCTGACTACAGCGACTTCCCCAAGAGGAGTGTCCTCCCGGGCAGCAAGCAGCACTCGCCCTCCCTCTccgcctcctccagctcctctgtACACACGGGAACCCAACTGAATGGTTTTGGGAAGACGCCTCTTTTCCTCGGGGGAGGGAACCCGTTCACCGCAGTCAAGCTACGTCCCACAGTCACCAATGACCGCTCAGGCCCAGTCATCTAAACCTCCAGACCCACCCTCCTGTCCACCTCTACACAGGAGCGGCACCTCCAGCTGGGCATCACCCCATGCTGTCCCCCCTCCTCCAGGCGGATGGACCCAGGGCCGGACACTAGTGTACGGGACAACTTGACACTGTGGGCTGCTGTGCTGAAGATCCAGTAATTTCACTACTACAGATGCCATTAGAAATGACATTGTCTAATACACAGTTGCCCTACTGCTGCAAACGCTCTCCCTGAGAAGGTGGGAGGATTTATTTATGTAAACAGATGCACATATATAGATTTTCTAGACCTATTTTTGTCGGTGATGATGAGTGGCGACATACTACATGCGTTCTCGCTGGGCGTGTGTGAAAAGGAGTCGAGGAAAGCCTGAGATTGGGCCGTTGAAATATCAGAATGTATTTCTGactcttttttttgttgcttcaaTCACTCGTCAAAAAATGTTAGTTGCCATAGGGCAGTAGATAAATGAATGTATGCAATACGGGACCTATGCATCACAATTTACAGAGGTCCTTATGGTAGCGTTGCTCGTTATTGTTGATGTATCTCGAATATGATATGTAAAATTGCATTGTTGCTATCATTACTAAAGACCAACTGCTTAGTGACTGTCGAATAGAAGTATACTCATTCAAGGGAAGCGCACATCATTTTTCCCCCTCAACTCCTTCCAAGAAGTGTACAACAAATTTGATTGGTTGAGTGTGTCATTGTCATTTTGCTGATTGGTTTTTCAGTTAAGTGTTCATACAGTGCTGCTGTTACTAGTGGAAGATGTGAGACCTGTTTACCTTAACTCTATATACCAACAGTAATCATTCTGTGAAACGTCTCTCATCTGTCTGTTATTCAAGTAGCccgggtcatgttcattaggcaccaaacggaagaaagcagactgaaacctTTGAGGGAAAAATCAACTGTTTTAAAACGTTTTCCCTTACGTTTCCTAATGAATATGAGCCAGTAGTGCTGTGGACATCCATTTTTAAAAGGACATGGTTAAATGGAACTCATAACTTCCCATAGACCGTGCAGCCATTTTGCTTTTATCTTCATGCTTCATGGAAGGCATTTTCAACCTAGTGGCTAATTTGATCATTTTTCTTTGGTCTGCCTTGCCTACTCCCTGAGTTTGGAACGTTGCTGtatgaaaataaacaaatatacactgaacaaaaatgtaaacgcagcatgtaaagtgttggtcccatgtttcatgagctgaaataaaatattccagaaatgttccatatgca
>XM_036941588.1
TGTCCACTGTACACGGTCACCTTTCATAGCACTAATGAATGACGTCGAACAATAACACCCTGCCCGCCTACCTTTCCCACCAACCGACTCACTGTTAATCGAAGCAGAAGTTTGACAGCTCAGCTTTTACCCCAGGCCGTCCTTTGAGAACGTACGGTTGCACTTCACTTTTGCCTTCGGAAGAAATTGTCACTCCCTTTTTCATGATCGACTACTGTAGAAGGGAAAGACAGGGATATAACCATGTCGAGGGACCCTGAAGAAGTGAACAAGCTCACCGAAAGTACATACAAGaaTGTAATGGAACAGTTCAACCCTGGGCTCAGGAACCTGGTCAACCTGGGGAAGAGCTATGAGAAATCAGTGGCAGCGATGAGCCTGGCTGGAAAGGTGTACTTTGATGCGGTCTCTAAGATCGGAGAGAATGCTGcggtctctcctgtctccagggaGTTGGGCGTTGTGCTGATGGAGATATCCGAGGTCCACAGGAAAGTTCACCTTGAGCTAGAGGAGAATTTTAAGAGGTTTCACAGCGAGATAATAGCTGAAttggagaggaagacagacatgGATGTAAAATACATGAcaGCCACCTTTAAGAGGTACCAGACCGAGCACAAGATGAAGCAGGACTCTCTGGAGAGGTCGCAGTCTGACCTGAAGAAACTCAGGAGGAAGAGCCAGGGCAAGAACACCAACAAGTACGAAAACAAGGAGAGTGAGTGCCTGGAGACGCTGAGGTCAGGGCAGATGGACATGCAGAAGTTCATCGCCGACGGCTGCAAGGAGGCTCTGCTGGAGGAGAAGAGACGCTTCTGCTTCCTGGTGGACAAACACTGCACCTTCTCCTATCAGATCGCTGCCTTCCACGACAAGGCCAGAGACATGCTTTTCGGGAAGCTGCCCACCTGGCAGGACAAGTGTGGCGATGCCACCAACGTGCCCGAGAGCGTGATGTCTATGATTGAGGGTCTTCGCACCCCAGTGTCCATCACCCCCCAGGCCTCCCCCATGTCCCAGAGACACAGTAGGAGCAACTCCATATTCCGGGACACAGTTCCACCCCCTGCCCCGGCACTGAAGGCTCAGACCAGCCCATTGGCCAGTATGTTCACGCAGGACACACCCACAACAAACTCAGTCACCAGAGAGACTGAGAGTGgcacagactacAGGGAcaatggaggggaggagagtggcgGTCTAGGTCCCAGGTCAGTGTCTGTGGCCACAGGACTCAACAACATTGTGAAGAGACCCAGGGTCCGCACCATCTTCCCCCACACCTCTGGGACCAACTCTACGCTGCTCAGCTTTGACGAGGGAGACATCATCACCCTGCTCATACCTGACGAGAGGGACGGATGGCTCTACGGAGAACTGGAGAAAACCAGACAGAGGGGATGGTTTCCATCATCCTATTGCCGGGCATATTCAGAGCCAATAGTGAATAACAACAGtgtgGGGGCTCCTCCCATGCGCAGTAAGAGCGTGGTGAACCTGCTCCAccaggacacagagacagatgatTCCTCCATGATCCTCCCCCCTCCTGACTACAGCGACTTCCCCAAGAGGAGTGTCCTCCCGGGCAGCAAGCAGCACTCGCCCTCCCTCTccgcctcctccagctcctctgtACACACGGGAACCCAACTGAATGGTTTTGGGAAGACGCCTCTTTTCCTCGGGGGAGGGAACCCGTTCACCGCAGTCAAGCTACGTCCCACAGTCACCAATGACCGCTCAGGCCCAGTCATCTAAACCTCCAGACCCACCCTCCTGTCCACCTCTACACAGGAGCGGCACCTCCAGCTGGGCATCACCCCATGCTGTCCCCCCTCCTCCAGGCGGATGGACCCAGGGCCGGACACTAGTGTACGGGACAACTTGACACTGTGGGCTGCTGTGCTGAAGATCCAGTAATTTCACTACTACAGATGCCATTAGAAATGACATTGTCTAATACACAGTTGCCCTACTGCTGCAAACGCTCTCCCTGAGAAGGTGGGAGGATTTATTTATGTAAACAGATGCACATATATAGATTTTCTAGACCTATTTTTGTCGGTGATGATGAGTGGCGACATACTACATGCGTTCTCGCTGGGCGTGTGTGAAAAGGAGTCGAGGAAAGCCTGAGATTGGGCCGTTGAAATATCAGAATGTATTTCTGactcttttttttgttgcttcaaTCACTCGTCAAAAAATGTTAGTTGCCATAGGGCAGTAGATAAATGAATGTATGCAATACGGGACCTATGCATCACAATTTACAGAGGTCCTTATGGTAGCGTTGCTCGTTATTGTTGATGTATCTCGAATATGATATGTAAAATTGCATTGTTGCTATCATTACTAAAGACCAACTGCTTAGTGACTGTCGAATAGAAGTATACTCATTCAAGGGAAGCGCACATCATTTTTCCCCCTCAACTCCTTCCAAGAAGTGTACAACAAATTTGATTGGTTGAGTGTGTCATTGTCATTTTGCTGATTGGTTTTTCAGTTAAGTGTTCATACAGTGCTGCTGTTACTAGTGGAAGATGTGAGACCTGTTTACCTTAACTCTATATACCAACAGTAATCATTCTGTGAAACGTCTCTCATCTGTCTGTTATTCAAGTAGCccgggtcatgttcattaggcaccaaacggaagaaagcagactgaaacctTTGAGGGAAAAATCAACTGTTTTAAAACGTTTTCCCTTACGTTTCCTAATGAATATGAGCCAGTAGTGCTGTGGACATCCATTTTTAAAAGGACATGGTTAAATGGAACTCATAACTTCCCATAGACCGTGCAGCCATTTTGCTTTTATCTTCATGCTTCATGGAAGGCATTTTCAACCTAGTGGCTAATTTGATCATTTTTCTTTGGTCTGCCTTGCCTACTCCCTGAGTTTGGAACGTTGCTGtatgaaaataaacaaatatacactgaacaaaaatgtaaacgcagcatgtaaagtgttggtcccatgtttcatgagctgaaataaaatattccagaaatgttccatatgca

Function

NR:

description
brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1

GO: NA

KEGG:

id description
K20127 BAIAP2L1, IRTKS; BAI1-associated protein 2-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941587.1 False 3176 mRNA 0.49 14 56125290 56203810
XM_036941588.1 True 3040 mRNA 0.49 15 56125290 56203810

Neighbor

gene id symbol gene type direction distance location
LOC110485237 LOC106606659 coding downstream 14319 56088292 ~ 56110984 (-)
LOC110486851 LOC106606669 coding downstream 88468 56029421 ~ 56036822 (-)
LOC110538789 LOC106606674 coding downstream 572790 55533247 ~ 55574537 (-)
LOC110485238 LOC106601829 coding downstream 615372 55434816 ~ 55509918 (-)
LOC110519575 LOC106606659 coding downstream 706229 55394864 ~ 55419061 (-)
LOC110515093 LOC106606674 coding upstream 23233 56226179 ~ 56250925 (-)
LOC110486859 srebf1 coding upstream 707555 56911365 ~ 56957646 (-)
LOC110486860 tom1l2 coding upstream 758267 56960592 ~ 57007990 (-)
LOC110486894 LOC106601810 coding upstream 850643 57054453 ~ 57085521 (-)
nduba LOC106601814 coding upstream 890502 57094312 ~ 57099778 (-)
G1189186 NA non-coding downstream 1705 56119551 ~ 56123585 (-)
G1189193 NA non-coding downstream 8819 56116163 ~ 56116471 (-)
G1189292 NA non-coding downstream 62099 55982971 ~ 56063191 (-)
G1189290 NA non-coding downstream 103738 56019068 ~ 56021552 (-)
G1189361 NA non-coding upstream 14250 56218060 ~ 56317827 (-)
G1189397 NA non-coding upstream 134306 56338116 ~ 56338331 (-)
G1189410 NA non-coding upstream 160581 56364391 ~ 56364880 (-)
G1189418 LOC106613263 non-coding upstream 174893 56378703 ~ 56378989 (-)
G1189279 LOC106601786 other downstream 209405 55912224 ~ 55915885 (-)
LOC110516592 LOC106601772 other downstream 912575 55209614 ~ 55242150 (-)
LOC110486836 LOC106606701 other downstream 1098842 55022619 ~ 55026465 (-)
G1189660 LOC106601786 other upstream 466483 56670293 ~ 56674238 (-)
G1190199 LOC106601813 other upstream 885361 57089171 ~ 57089915 (-)
G1190405 NA other upstream 1292178 57495988 ~ 57499155 (-)
LOC110486915 LOC106606556 other upstream 1495441 57698059 ~ 57706813 (-)

Expression


Co-expression Network