LOC100136119 (pdgfa)


Basic Information

Item Value
gene id LOC100136119
gene name pdgfa
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58918836 ~ 58956176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035620.1
GCTCTGTCGCTGTGAGGCCGAACACTCCTTCCAGCTTTAGAGAGAAACCTAGTATCCGCAACAAGTCACAAGTGCAAGTGTAGCGGACGGCCTATGAACAAGACTCAGAGAGCCGAACATGCATGCTgaagtCCCGCAGGAGTTGATAGAGAGACTGTCCCACAGCGAAATCCACAGCATCAGCGACCTCCAGCGGCTATTGGACTCCGAGATAGACGCCCCCGTAGGTGCGGAAAATGAGGTCATCGAAGAGACCAAGCCGATGCAGAAGCATCATAAGAACTACTCCCAACAGCATGGCTACTCAGACCTGAAGAGCTCACAGATACACAGCCGACGCAAGAGGAGCGTTGaggaggCGGTGCCTGCGGTGTGTAAGACGCGGACGGTGATCTATGAGATCCCGCGCAGCCAGGTGGACCCCACGGCTGCCAACTTCCTGATATGGCCGCCGTGCGTGGAGGTCAAGAGGTGCACGGGATGCTGCAACACCAGCAACATGCGCTGCCACCCCTCACGCAGGCACCACCGCACCGTTAAGGTGGCCAAGGTGGAGTATGTGCGGAGGAAACCCAAGCTGAAGGAGGTCTTGGTCAGGTTAGAAGACCACCTGGAGTGTGTGTGCCAGTCACAACATCACGTGACCGAGCACTCAGACGCAGACACAGACCACCATACTAGGGCTAAAGGTAGGAAAAGGAAACCTAAAAAACTAAAGCTCAACAAGGATTTATTGGCGACATAATAAACTTGAACACATTATTCCAAAGTCCGACCGCCGGACCCCCCGGCTCCAACAGTGGACGTAAGGTGAGACCCCAGCAGCATTGGACTTCAGTGTGGAAGGGGCCAAAGAGAGGATGCTGCCATATTTGGACTGCTGACCTACCCCCTTCCCTGACCCCACCCCAAGCCACCTACCGCCTTTTAAAAACAAAGATTACTgtaaagagaaaaaaagacaaaaagTTAATAAAATGCCAAAGGTGCTTTTTTCTATTACCGTAAAAAGGAATGCAGAAGGTCTCTGCCAAGCGCAGCAGAACCAACCAATCAAACAATGACGCGGATGAGGATGGTGAAGCCAATAAAGAGCTGggcagaaaagagaggaggaggaggacaagatGGGTTGTCGTTTGTTGAGGAAACAGGACAATTTGACGATCACAGAGAGAGATCCAGGATGGATTATTGGATTAAGCCTCGATGGGGGATCTGTCGACTGGATCCTAAAAGGACACAGAGAGGGACAATCAGTGGACTCTTCGGGACGTGTGGAGGCTTGCATGTTCCTAGCCGTTGGCCTAAGTGACACTTGCCTGGACAGTCaatgactgacagagagagagggagagagggaaagagatgttGAGAGAAGttgtagagaggtgtagaaggTACTGGTCGTGTTGCTTGTTGTTCCAGAACTTTCTGTACACTGTAGTGGAACTTGTGAACATTCTGGAACTCATAGAATGGTCGCCTATTTAGTCTATTTTGGATAAAGTGTTGGGAGAAGTGTTTGGAGTCATCAGGACCTGTTGTACCAAGATgtcttctctgcttctctctcctggGTTCCCCTGTCTGCTCCTATTGGGATTGTGCCAGTCACCATATACACTACAGAACGATTCAGAAAGGAAGATTCATTCATTGCTACTAATAAACTATTTATACGTGTGAAcgttttcctttctctctctctccctccaagaCATTATGTTTTCTGTGACATGTAAGATTCATGTTCTGTCTGATCTTCTGGTAGTGAATCTTCATGTCCACATGTTGTTTGTAGTTGTTACTCATGTTCAATGTTGCCTTATTATGTGCCAGTATATTATCTGAACAGTCTCAAGTCTAGTTGTATGGGCTGGAAATGTAAGGAAGCGTgagaaggaggagatgggaggacagAGTCTGTACAAGTACAGGAAGATGCTTTAtttttgttaaaaaaatatattatgctTACTTATATTCAAGCAGGAAGTATGTTTGTTATTTCTTTGTTTGTTGTGGTTGAATGCTTTTATTTAAACCATGGAAACGATGCAGGACTGGGGGTGGTGAAGTGTATCAGGCCCCAGCAATGCACCCTGtttggtggtgtagggtaggctTACATCAGCAGTGCTGTACTGTATTAtctagagagatggatagagctaacctggtcccagatcagtttgtgttgtcCTGCAAACACATATAGTCATTGGCAAGGCAGCACAAACCGATCTGAGATCAGGTTAGTGGAGAGCTGGCTGAGGATAGACTCCGTCTGGGGCATCGTTGGACTGTCTCTTTAACCCAGTTATCTAGCCAACAGTTACACCCAGTAACCAGAGCGTCATTATACACAACAGAACgttcagcatgtgtgtgtgtaaccactTTTAACCCACATCACACTCCTTTGATACGCTGGTGCCCAGTCCGCCCCACCAGCACACAAGCTGTTCTTAACGAGTACAAAGTCCAGCTTGAACGAGAGAGTTTGTGAACAAATCAACATGAATGGTTCCCTAGTTAATCAAGCAGCAGTCTTCCATTGACACGTTAACAACGACGAAGACTGTTCCACTGTTGATGAGTGAAAGATTAAAAAAGAAGATACCACTGTTTATGGAGAGACTGACACCAAATCTCTAACAACACCCTATTTCCCGTACGGTgaagtgtactactttagaccagagccactggaccaaaagtagtgcgctacatagggaataggtggtTGTCGTTTGGCACACACTGAATCAATAGAAAGACCTGGGCACTTTTCCAaaatgtctcagagtaggagtgctgttcATCTTATACATTATGATCTAAACAGCtaaactgatccaagatcagcactTTATGAAGTCCTGGGTGAGAGGCATGTTGAGAGAAAATAGATGACTGAAGAAGCAACAACACTGTATCTGCAGCTGCTTCGTGTTGTGGCAGCAACATGTTCAGCTGCACTATACAGACTCCCAAGGTGATTCCATTGGTGCTGTATGTATAAAGGAAATCAGAAGAAGTTTCCCCACCATTTTGCAATGcattcatttattcattcattgTCGATAGACCAGGGACCATTGCTTACAGTAACTAAAGAAACTACAACAACACAAGCTTATACCATTTTTTATTTGGGCCTCTATTGGATAAAAACAGCAATGATTAtaatttatatatttatgttttcaataataaatacattctgcttATCAAACTGTA
>XR_005035622.1
CATATTAGGTCTActtgtatttatatataaaatgTTCTTTCTCAACCATTTTGTGCTGACTTTGTGCATATTAAGTCATAAAAGactattagatttttttttgtgctATTTAATCTGCTAAAAAACGAACAAACAAGAAGCAAACTTGTAGCCCTGAGGCGACACAAATGTTTTGCAATATCAGCACCACCCCACTTGCCATATGAATGCATTGCATAGAACGCTTTCAGAAACAAGCATTGTAACTGCACCAAGAAACATATTTGACTTCTTTTTGGCGGTCGATCCAAATCTGTTTATGCGTGAGCCAACTGTGACAACGTTATGGTTGAGCCAGCCAAACGCTTTCATGGGAACCGCACTTGGGATATATAAATAGCCTAGGCTCTGTCGCTGTGAGGCCGAACACTCCTTCCAGCTTTAGAGAGAAACCTAGTATCCGCAACAAGTCACAAGTGCAAGTGTAGCGGACGGCCTATGAACAAGACTCAGAGAGCCGAACATGCATGCTgaagtCCCGCAGGAGTTGATAGAGAGACTGTCCCACAGCGAAATCCACAGCATCAGCGACCTCCAGCGGCTATTGGACTCCGAGATAGACGCCCCCGTAGaggaggCGGTGCCTGCGGTGTGTAAGACGCGGACGGTGATCTATGAGATCCCGCGCAGCCAGGTGGACCCCACGGCTGCCAACTTCCTGATATGGCCGCCGTGCGTGGAGGTCAAGAGGTGCACGGGATGCTGCAACACCAGCAACATGCGCTGCCACCCCTCACGCAGGCACCACCGCACCGTTAAGGTGGCCAAGGTGGAGTATGTGCGGAGGAAACCCAAGCTGAAGGAGGTCTTGGTCAGGTTAGAAGACCACCTGGAGTGTGTGTGCCAGTCACAACATCACGTGACCGAGCACTCAGACGCAGACACAGACCACCATACTAGGGCTAAAGGTAGGAAAAGGAAACCTAAAAAACTAAAGCTCAACAAGGATTTATTGGCGACATAATAAACTTGAACACATTATTCCAAAGTCCGACCGCCGGACCCCCCGGCTCCAACAGTGGACGTAAGGTGAGACCCCAGCAGCATTGGACTTCAGTGTGGAAGGGGCCAAAGAGAGGATGCTGCCATATTTGGACTGCTGACCTACCCCCTTCCCTGACCCCACCCCAAGCCACCTACCGCCTTTTAAAAACAAAGATTACTgtaaagagaaaaaaagacaaaaagTTAATAAAATGCCAAAGGTGCTTTTTTCTATTACCGTAAAAAGGAATGCAGAAGGTCTCTGCCAAGCGCAGCAGAACCAACCAATCAAACAATGACGCGGATGAGGATGGTGAAGCCAATAAAGAGCTGggcagaaaagagaggaggaggaggacaagatGGGTTGTCGTTTGTTGAGGAAACAGGACAATTTGACGATCACAGAGAGAGATCCAGGATGGATTATTGGATTAAGCCTCGATGGGGGATCTGTCGACTGGATCCTAAAAGGACACAGAGAGGGACAATCAGTGGACTCTTCGGGACGTGTGGAGGCTTGCATGTTCCTAGCCGTTGGCCTAAGTGACACTTGCCTGGACAGTCaatgactgacagagagagagggagagagggaaagagatgttGAGAGAAGttgtagagaggtgtagaaggTACTGGTCGTGTTGCTTGTTGTTCCAGAACTTTCTGTACACTGTAGTGGAACTTGTGAACATTCTGGAACTCATAGAATGGTCGCCTATTTAGTCTATTTTGGATAAAGTGTTGGGAGAAGTGTTTGGAGTCATCAGGACCTGTTGTACCAAGATgtcttctctgcttctctctcctggGTTCCCCTGTCTGCTCCTATTGGGATTGTGCCAGTCACCATATACACTACAGAACGATTCAGAAAGGAAGATTCATTCATTGCTACTAATAAACTATTTATACGTGTGAAcgttttcctttctctctctctccctccaagaCATTATGTTTTCTGTGACATGTAAGATTCATGTTCTGTCTGATCTTCTGGTAGTGAATCTTCATGTCCACATGTTGTTTGTAGTTGTTACTCATGTTCAATGTTGCCTTATTATGTGCCAGTATATTATCTGAACAGTCTCAAGTCTAGTTGTATGGGCTGGAAATGTAAGGAAGCGTgagaaggaggagatgggaggacagAGTCTGTACAAGTACAGGAAGATGCTTTAtttttgttaaaaaaatatattatgctTACTTATATTCAAGCAGGAAGTATGTTTGTTATTTCTTTGTTTGTTGTGGTTGAATGCTTTTATTTAAACCATGGAAACGATGCAGGACTGGGGGTGGTGAAGTGTATCAGGCCCCAGCAATGCACCCTGtttggtggtgtagggtaggctTACATCAGCAGTGCTGTACTGTATTAtctagagagatggatagagctaacctggtcccagatcagtttgtgttgtcCTGCAAACACATATAGTCATTGGCAAGGCAGCACAAACCGATCTGAGATCAGGTTAGTGGAGAGCTGGCTGAGGATAGACTCCGTCTGGGGCATCGTTGGACTGTCTCTTTAACCCAGTTATCTAGCCAACAGTTACACCCAGTAACCAGAGCGTCATTATACACAACAGAACgttcagcatgtgtgtgtgtaaccactTTTAACCCACATCACACTCCTTTGATACGCTGGTGCCCAGTCCGCCCCACCAGCACACAAGCTGTTCTTAACGAGTACAAAGTCCAGCTTGAACGAGAGAGTTTGTGAACAAATCAACATGAATGGTTCCCTAGTTAATCAAGCAGCAGTCTTCCATTGACACGTTAACAACGACGAAGACTGTTCCACTGTTGATGAGTGAAAGATTAAAAAAGAAGATACCACTGTTTATGGAGAGACTGACACCAAATCTCTAACAACACCCTATTTCCCGTACGGTgaagtgtactactttagaccagagccactggaccaaaagtagtgcgctacatagggaataggtggtTGTCGTTTGGCACACACTGAATCAATAGAAAGACCTGGGCACTTTTCCAaaatgtctcagagtaggagtgctgttcATCTTATACATTATGATCTAAACAGCtaaactgatccaagatcagcactTTATGAAGTCCTGGGTGAGAGGCATGTTGAGAGAAAATAGATGACTGAAGAAGCAACAACACTGTATCTGCAGCTGCTTCGTGTTGTGGCAGCAACATGTTCAGCTGCACTATACAGACTCCCAAGGTGATTCCATTGGTGCTGTATGTATAAAGGAAATCAGAAGAAGTTTCCCCACCATTTTGCAATGcattcatttattcattcattgTCGATAGACCAGGGACCATTGCTTACAGTAACTAAAGAAACTACAACAACACAAGCTTATACCATTTTTTATTTGGGCCTCTATTGGATAAAAACAGCAATGATTAtaatttatatatttatgttttcaataataaatacattctgcttATCAAACTGTA
>XM_036941738.1
AGCGGCTCCGGTGCGCTCGAAACTTTATTCACTCCAGAGTCCAACACAGAGACGGACCTGTCGAGCTCTCTCTATTCCCCACTGCAAGCTAAGCACTCACTGGATAGAACACACGGACAACTTTTTACAGAGCTATTTCCGCCTCTCTATTTTTGGTTTTCATTACGGGACTTAAACCTGGGATTGTACCATTTAAAAAAGACGcactttttgttgttgaaatattTAAATGTCATGGTTTTTCATGTTCATTGTATAAATCATAATTTTTGGGTATAGTACTCGAAATATTTGAGAACAAGGGAAACTGTTACACATGTTTTCCAACCTCTGAAGAAGACTTAACAAGTTACTCGTCCTTGGGGGTTCGATAACAAGTGCAATGATTGCCAAGGTCTTCTGTTGGGATTGCCTTACTGCTCAACTCGTCTAAGGAGCCAGCCATGTCCTTTTGTCTGCTCTACTTCTGTCACGGAGAGAGGGCTCGGAGTGGCGGACGCGCACGAATGTGAATTACATTGCAGTCAACTACCCTACTTCAAAGCACTTCAGATATCCGCACAGTTCCCCAAACAAGTGTTTAGGAGTTGTACCGCGGGCGACTGAACGGGACTACTCACATGTTCCTCTCTCCAAGGGATGGTTCTTGATCATCCGCGGGCAGGAGCGACTTTGCGGCTCCTACAGCAGGAGACGTTTTCTTGTTTTGGGGGAAATCGGAATTAAAGGGAAATGAGACCTGTACTTTGCTACTTCCTGCTCTGTACATCGTACCTGCTGAATGCTGTTGCTGAGgaagtCCCGCAGGAGTTGATAGAGAGACTGTCCCACAGCGAAATCCACAGCATCAGCGACCTCCAGCGGCTATTGGACTCCGAGATAGACGCCCCCGTAGGTGCGGAAAATGAGGTCATCGAAGAGACCAAGCCGATGCAGAAGCATCATAAGAACTACTCCCAACAGCATGGCTACTCAGACCTGAAGAGCTCACAGATACACAGCCGACGCAAGAGGAGCGTTGaggaggCGGTGCCTGCGGTGTGTAAGACGCGGACGGTGATCTATGAGATCCCGCGCAGCCAGGTGGACCCCACGGCTGCCAACTTCCTGATATGGCCGCCGTGCGTGGAGGTCAAGAGGTGCACGGGATGCTGCAACACCAGCAACATGCGCTGCCACCCCTCACGCAGGCACCACCGCACCGTTAAGGTGGCCAAGGTGGAGTATGTGCGGAGGAAACCCAAGCTGAAGGAGGTCTTGGTCAGGTTAGAAGACCACCTGGAGTGTGTGTGCCAGTCACAACATCACGTGACCGAGCACTCAGACGCAGACACAGTGGACGTAAGGTGAGACCCCAGCAGCATTGGACTTCAGTGTGGAAGGGGCCAAAGAGAGGATGCTGCCATATTTGGACTGCTGACCTACCCCCTTCCCTGACCCCACCCCAAGCCACCTACCGCCTTTTAAAAACAAAGATTACTgtaaagagaaaaaaagacaaaaagTTAATAAAATGCCAAAGGTGCTTTTTTCTATTACCGTAAAAAGGAATGCAGAAGGTCTCTGCCAAGCGCAGCAGAACCAACCAATCAAACAATGACGCGGATGAGGATGGTGAAGCCAATAAAGAGCTGggcagaaaagagaggaggaggaggacaagatGGGTTGTCGTTTGTTGAGGAAACAGGACAATTTGACGATCACAGAGAGAGATCCAGGATGGATTATTGGATTAAGCCTCGATGGGGGATCTGTCGACTGGATCCTAAAAGGACACAGAGAGGGACAATCAGTGGACTCTTCGGGACGTGTGGAGGCTTGCATGTTCCTAGCCGTTGGCCTAAGTGACACTTGCCTGGACAGTCaatgactgacagagagagagggagagagggaaagagatgttGAGAGAAGttgtagagaggtgtagaaggTACTGGTCGTGTTGCTTGTTGTTCCAGAACTTTCTGTACACTGTAGTGGAACTTGTGAACATTCTGGAACTCATAGAATGGTCGCCTATTTAGTCTATTTTGGATAAAGTGTTGGGAGAAGTGTTTGGAGTCATCAGGACCTGTTGTACCAAGATgtcttctctgcttctctctcctggGTTCCCCTGTCTGCTCCTATTGGGATTGTGCCAGTCACCATATACACTACAGAACGATTCAGAAAGGAAGATTCATTCATTGCTACTAATAAACTATTTATACGTGTGAAcgttttcctttctctctctctccctccaagaCATTATGTTTTCTGTGACATGTAAGATTCATGTTCTGTCTGATCTTCTGGTAGTGAATCTTCATGTCCACATGTTGTTTGTAGTTGTTACTCATGTTCAATGTTGCCTTATTATGTGCCAGTATATTATCTGAACAGTCTCAAGTCTAGTTGTATGGGCTGGAAATGTAAGGAAGCGTgagaaggaggagatgggaggacagAGTCTGTACAAGTACAGGAAGATGCTTTAtttttgttaaaaaaatatattatgctTACTTATATTCAAGCAGGAAGTATGTTTGTTATTTCTTTGTTTGTTGTGGTTGAATGCTTTTATTTAAACCATGGAAACGATGCAGGACTGGGGGTGGTGAAGTGTATCAGGCCCCAGCAATGCACCCTGtttggtggtgtagggtaggctTACATCAGCAGTGCTGTACTGTATTAtctagagagatggatagagctaacctggtcccagatcagtttgtgttgtcCTGCAAACACATATAGTCATTGGCAAGGCAGCACAAACCGATCTGAGATCAGGTTAGTGGAGAGCTGGCTGAGGATAGACTCCGTCTGGGGCATCGTTGGACTGTCTCTTTAACCCAGTTATCTAGCCAACAGTTACACCCAGTAACCAGAGCGTCATTATACACAACAGAACgttcagcatgtgtgtgtgtaaccactTTTAACCCACATCACACTCCTTTGATACGCTGGTGCCCAGTCCGCCCCACCAGCACACAAGCTGTTCTTAACGAGTACAAAGTCCAGCTTGAACGAGAGAGTTTGTGAACAAATCAACATGAATGGTTCCCTAGTTAATCAAGCAGCAGTCTTCCATTGACACGTTAACAACGACGAAGACTGTTCCACTGTTGATGAGTGAAAGATTAAAAAAGAAGATACCACTGTTTATGGAGAGACTGACACCAAATCTCTAACAACACCCTATTTCCCGTACGGTgaagtgtactactttagaccagagccactggaccaaaagtagtgcgctacatagggaataggtggtTGTCGTTTGGCACACACTGAATCAATAGAAAGACCTGGGCACTTTTCCAaaatgtctcagagtaggagtgctgttcATCTTATACATTATGATCTAAACAGCtaaactgatccaagatcagcactTTATGAAGTCCTGGGTGAGAGGCATGTTGAGAGAAAATAGATGACTGAAGAAGCAACAACACTGTATCTGCAGCTGCTTCGTGTTGTGGCAGCAACATGTTCAGCTGCACTATACAGACTCCCAAGGTGATTCCATTGGTGCTGTATGTATAAAGGAAATCAGAAGAAGTTTCCCCACCATTTTGCAATGcattcatttattcattcattgTCGATAGACCAGGGACCATTGCTTACAGTAACTAAAGAAACTACAACAACACAAGCTTATACCATTTTTTATTTGGGCCTCTATTGGATAAAAACAGCAATGATTAtaatttatatatttatgttttcaataataaatacattctgcttATCAAACTGTA
>XR_005035619.1
ATTCAGCGGCTCCGGTGCGCTCGAAACTTTATTCACTCCAGAGTCCAACACAGAGACGGACCTGTCGAGCTCTCTCTATTCCCCACTGCAAGCTAAGCACTCACTGGATAGAACACACGGACAACTTTTTACAGAGCTATTTCCGCCTCTCTATTTTTGGTTTTCATTACGGGACTTAAACCTGGGATTGTACCATTTAAAAAAGACGcactttttgttgttgaaatattTAAATGTCATGGTTTTTCATGTTCATTGTATAAATCATAATTTTTGGGTATAGTACTCGAAATATTTGAGAACAAGGGAAACTGTTACACATGTTTTCCAACCTCTGAAGAAGACTTAACAAGTTACTCGTCCTTGGGGGTTCGATAACAAGTGCAATGATTGCCAAGGTCTTCTGTTGGGATTGCCTTACTGCTCAACTCGTCTAAGGAGCCAGCCATGTCCTTTTGTCTGCTCTACTTCTGTCACGGAGAGAGGGCTCGGAGTGGCGGACGCGCACGAATGTGAATTACATTGCAGTCAACTACCCTACTTCAAAGCACTTCAGATATCCGCACAGTTCCCCAAACAAGTGTTTAGGAGTTGTACCGCGGGCGACTGAACGGGACTACTCACATGTTCCTCTCTCCAAGGGATGGTTCTTGATCATCCGCGGGCAGGAGCGACTTTGCGGCTCCTACAGCAGGAGACGTTTTCTTGTTTTGGGGGAAATCGGAATTAAAGGGAAATGAGACCTGTACTTTGCTACTTCCTGCTCTGTACATCGTACCTGCTGAATGCTGTTGCTGAGgaagtCCCGCAGGAGTTGATAGAGAGACTGTCCCACAGCGAAATCCACAGCATCAGCGACCTCCAGCGGCTATTGGACTCCGAGATAGACGCCCCCGTAGGTGCGGAAAATGAGGTCATCGAAGAGACCAAGCCGATGCAGAAGCATCATAAGAACTACTCCCAACAGCATGGCTACTCAGACCTGAAGAGCTCACAGATACACAGCCGACGCAAGAGGAGCGTTGaggaggCGGTGCCTGCGGTGTGTAAGACGCGGACGGTGATCTATGAGATCCCGCGCAGCCAGGTGGACCCCACGGCTGCCAACTTCCTGATATGGCCGCCGTGCGTGGAGGTCAAGAGGTGCACGGGATGCTGCAACACCAGCAACATGCGCTGCCACCCCTCACGCAGGCACCACCGCACCGTTAAGGTGGCCAAGGTGGAGTATGTGCGGAGGAAACCCAAGCTGAAGGAGGTCTTGGTCAGGTTAGAAGACCACCTGGAGTGTGTGTGCCAGTCACAACATCACGTGACCGAGCACTCAGACGCAGACACAGACCACCATACTAGGGCTAAAGGTAGGAAAAGGAAACCTAAAAAACTAAAGCTCAACAAGGATTTATTGGCGACATAATAAACTTGAACACATTATTCCAAAGTCCGACCGCCGGACCCCCCGGCTCCAACAGTGGACGTAAGGTGAGACCCCAGCAGCATTGGACTTCAGTGTGGAAGGGGCCAAAGAGAGGATGCTGCCATATTTGGACTGCTGACCTACCCCCTTCCCTGACCCCACCCCAAGCCACCTACCGCCTTTTAAAAACAAAGATTACTgtaaagagaaaaaaagacaaaaagTTAATAAAATGCCAAAGGTGCTTTTTTCTATTACCGTAAAAAGGAATGCAGAAGGTCTCTGCCAAGCGCAGCAGAACCAACCAATCAAACAATGACGCGGATGAGGATGGTGAAGCCAATAAAGAGCTGggcagaaaagagaggaggaggaggacaagatGGGTTGTCGTTTGTTGAGGAAACAGGACAATTTGACGATCACAGAGAGAGATCCAGGATGGATTATTGGATTAAGCCTCGATGGGGGATCTGTCGACTGGATCCTAAAAGGACACAGAGAGGGACAATCAGTGGACTCTTCGGGACGTGTGGAGGCTTGCATGTTCCTAGCCGTTGGCCTAAGTGACACTTGCCTGGACAGTCaatgactgacagagagagagggagagagggaaagagatgttGAGAGAAGttgtagagaggtgtagaaggTACTGGTCGTGTTGCTTGTTGTTCCAGAACTTTCTGTACACTGTAGTGGAACTTGTGAACATTCTGGAACTCATAGAATGGTCGCCTATTTAGTCTATTTTGGATAAAGTGTTGGGAGAAGTGTTTGGAGTCATCAGGACCTGTTGTACCAAGATgtcttctctgcttctctctcctggGTTCCCCTGTCTGCTCCTATTGGGATTGTGCCAGTCACCATATACACTACAGAACGATTCAGAAAGGAAGATTCATTCATTGCTACTAATAAACTATTTATACGTGTGAAcgttttcctttctctctctctccctccaagaCATTATGTTTTCTGTGACATGTAAGATTCATGTTCTGTCTGATCTTCTGGTAGTGAATCTTCATGTCCACATGTTGTTTGTAGTTGTTACTCATGTTCAATGTTGCCTTATTATGTGCCAGTATATTATCTGAACAGTCTCAAGTCTAGTTGTATGGGCTGGAAATGTAAGGAAGCGTgagaaggaggagatgggaggacagAGTCTGTACAAGTACAGGAAGATGCTTTAtttttgttaaaaaaatatattatgctTACTTATATTCAAGCAGGAAGTATGTTTGTTATTTCTTTGTTTGTTGTGGTTGAATGCTTTTATTTAAACCATGGAAACGATGCAGGACTGGGGGTGGTGAAGTGTATCAGGCCCCAGCAATGCACCCTGtttggtggtgtagggtaggctTACATCAGCAGTGCTGTACTGTATTAtctagagagatggatagagctaacctggtcccagatcagtttgtgttgtcCTGCAAACACATATAGTCATTGGCAAGGCAGCACAAACCGATCTGAGATCAGGTTAGTGGAGAGCTGGCTGAGGATAGACTCCGTCTGGGGCATCGTTGGACTGTCTCTTTAACCCAGTTATCTAGCCAACAGTTACACCCAGTAACCAGAGCGTCATTATACACAACAGAACgttcagcatgtgtgtgtgtaaccactTTTAACCCACATCACACTCCTTTGATACGCTGGTGCCCAGTCCGCCCCACCAGCACACAAGCTGTTCTTAACGAGTACAAAGTCCAGCTTGAACGAGAGAGTTTGTGAACAAATCAACATGAATGGTTCCCTAGTTAATCAAGCAGCAGTCTTCCATTGACACGTTAACAACGACGAAGACTGTTCCACTGTTGATGAGTGAAAGATTAAAAAAGAAGATACCACTGTTTATGGAGAGACTGACACCAAATCTCTAACAACACCCTATTTCCCGTACGGTgaagtgtactactttagaccagagccactggaccaaaagtagtgcgctacatagggaataggtggtTGTCGTTTGGCACACACTGAATCAATAGAAAGACCTGGGCACTTTTCCAaaatgtctcagagtaggagtgctgttcATCTTATACATTATGATCTAAACAGCtaaactgatccaagatcagcactTTATGAAGTCCTGGGTGAGAGGCATGTTGAGAGAAAATAGATGACTGAAGAAGCAACAACACTGTATCTGCAGCTGCTTCGTGTTGTGGCAGCAACATGTTCAGCTGCACTATACAGACTCCCAAGGTGATTCCATTGGTGCTGTATGTATAAAGGAAATCAGAAGAAGTTTCCCCACCATTTTGCAATGcattcatttattcattcattgTCGATAGACCAGGGACCATTGCTTACAGTAACTAAAGAAACTACAACAACACAAGCTTATACCATTTTTTATTTGGGCCTCTATTGGATAAAAACAGCAATGATTAtaatttatatatttatgttttcaataataaatacattctgcttATCAAACTGTA
>XR_005035621.1
TCACTATATTCAGCGGCTCCGGTGCGCTCGAAACTTTATTCACTCCAGAGTCCAACACAGAGACGGACCTGTCGAGCTCTCTCTATTCCCCACTGCAAGCTAAGCACTCACTGGATAGAACACACGGACAACTTTTTACAGAGCTATTTCCGCCTCTCTATTTTTGGTTTTCATTACGGGACTTAAACCTGGGATTGTACCATTTAAAAAAGACGcactttttgttgttgaaatattTAAATGTCATGGTTTTTCATGTTCATTGTATAAATCATAATTTTTGGGTATAGTACTCGAAATATTTGAGAACAAGGGAAACTGTTACACATGTTTTCCAACCTCTGAAGAAGACTTAACAAGTTACTCGTCCTTGGGGGTTCGATAACAAGTGCAATGATTGCCAAGGTCTTCTGTTGGGATTGCCTTACTGCTCAACTCGTCTAAGGAGCCAGCCATGTCCTTTTGTCTGCTCTACTTCTGTCACGGAGAGAGGGCTCGGAGTGGCGGACGCGCACGAATGTGAATTACATTGCAGTCAACTACCCTACTTCAAAGCACTTCAGATATCCGCACAGTTCCCCAAACAAGTGTTTAGGAGTTGTACCGCGGGCGACTGAACGGGACTACTCACATGTTCCTCTCTCCAAGGGATGGTTCTTGATCATCCGCGGGCAGGAGCGACTTTGCGGCTCCTACAGCAGGAGACGTTTTCTTGTTTTGGGGGAAATCGGAATTAAAGGGAAATGAGACCTGTACTTTGCTACTTCCTGCTCTGTACATCGTACCTGCTGAATGCTGTTGCTGAGgaagtCCCGCAGGAGTTGATAGAGAGACTGTCCCACAGCGAAATCCACAGCATCAGCGACCTCCAGCGGCTATTGGACTCCGAGATAGACGCCCCCGTAGaggaggCGGTGCCTGCGGTGTGTAAGACGCGGACGGTGATCTATGAGATCCCGCGCAGCCAGGTGGACCCCACGGCTGCCAACTTCCTGATATGGCCGCCGTGCGTGGAGGTCAAGAGGTGCACGGGATGCTGCAACACCAGCAACATGCGCTGCCACCCCTCACGCAGGCACCACCGCACCGTTAAGGTGGCCAAGGTGGAGTATGTGCGGAGGAAACCCAAGCTGAAGGAGGTCTTGGTCAGGTTAGAAGACCACCTGGAGTGTGTGTGCCAGTCACAACATCACGTGACCGAGCACTCAGACGCAGACACAGACCACCATACTAGGGCTAAAGGTAGGAAAAGGAAACCTAAAAAACTAAAGCTCAACAAGGATTTATTGGCGACATAATAAACTTGAACACATTATTCCAAAGTCCGACCGCCGGACCCCCCGGCTCCAACAGTGGACGTAAGGTGAGACCCCAGCAGCATTGGACTTCAGTGTGGAAGGGGCCAAAGAGAGGATGCTGCCATATTTGGACTGCTGACCTACCCCCTTCCCTGACCCCACCCCAAGCCACCTACCGCCTTTTAAAAACAAAGATTACTgtaaagagaaaaaaagacaaaaagTTAATAAAATGCCAAAGGTGCTTTTTTCTATTACCGTAAAAAGGAATGCAGAAGGTCTCTGCCAAGCGCAGCAGAACCAACCAATCAAACAATGACGCGGATGAGGATGGTGAAGCCAATAAAGAGCTGggcagaaaagagaggaggaggaggacaagatGGGTTGTCGTTTGTTGAGGAAACAGGACAATTTGACGATCACAGAGAGAGATCCAGGATGGATTATTGGATTAAGCCTCGATGGGGGATCTGTCGACTGGATCCTAAAAGGACACAGAGAGGGACAATCAGTGGACTCTTCGGGACGTGTGGAGGCTTGCATGTTCCTAGCCGTTGGCCTAAGTGACACTTGCCTGGACAGTCaatgactgacagagagagagggagagagggaaagagatgttGAGAGAAGttgtagagaggtgtagaaggTACTGGTCGTGTTGCTTGTTGTTCCAGAACTTTCTGTACACTGTAGTGGAACTTGTGAACATTCTGGAACTCATAGAATGGTCGCCTATTTAGTCTATTTTGGATAAAGTGTTGGGAGAAGTGTTTGGAGTCATCAGGACCTGTTGTACCAAGATgtcttctctgcttctctctcctggGTTCCCCTGTCTGCTCCTATTGGGATTGTGCCAGTCACCATATACACTACAGAACGATTCAGAAAGGAAGATTCATTCATTGCTACTAATAAACTATTTATACGTGTGAAcgttttcctttctctctctctccctccaagaCATTATGTTTTCTGTGACATGTAAGATTCATGTTCTGTCTGATCTTCTGGTAGTGAATCTTCATGTCCACATGTTGTTTGTAGTTGTTACTCATGTTCAATGTTGCCTTATTATGTGCCAGTATATTATCTGAACAGTCTCAAGTCTAGTTGTATGGGCTGGAAATGTAAGGAAGCGTgagaaggaggagatgggaggacagAGTCTGTACAAGTACAGGAAGATGCTTTAtttttgttaaaaaaatatattatgctTACTTATATTCAAGCAGGAAGTATGTTTGTTATTTCTTTGTTTGTTGTGGTTGAATGCTTTTATTTAAACCATGGAAACGATGCAGGACTGGGGGTGGTGAAGTGTATCAGGCCCCAGCAATGCACCCTGtttggtggtgtagggtaggctTACATCAGCAGTGCTGTACTGTATTAtctagagagatggatagagctaacctggtcccagatcagtttgtgttgtcCTGCAAACACATATAGTCATTGGCAAGGCAGCACAAACCGATCTGAGATCAGGTTAGTGGAGAGCTGGCTGAGGATAGACTCCGTCTGGGGCATCGTTGGACTGTCTCTTTAACCCAGTTATCTAGCCAACAGTTACACCCAGTAACCAGAGCGTCATTATACACAACAGAACgttcagcatgtgtgtgtgtaaccactTTTAACCCACATCACACTCCTTTGATACGCTGGTGCCCAGTCCGCCCCACCAGCACACAAGCTGTTCTTAACGAGTACAAAGTCCAGCTTGAACGAGAGAGTTTGTGAACAAATCAACATGAATGGTTCCCTAGTTAATCAAGCAGCAGTCTTCCATTGACACGTTAACAACGACGAAGACTGTTCCACTGTTGATGAGTGAAAGATTAAAAAAGAAGATACCACTGTTTATGGAGAGACTGACACCAAATCTCTAACAACACCCTATTTCCCGTACGGTgaagtgtactactttagaccagagccactggaccaaaagtagtgcgctacatagggaataggtggtTGTCGTTTGGCACACACTGAATCAATAGAAAGACCTGGGCACTTTTCCAaaatgtctcagagtaggagtgctgttcATCTTATACATTATGATCTAAACAGCtaaactgatccaagatcagcactTTATGAAGTCCTGGGTGAGAGGCATGTTGAGAGAAAATAGATGACTGAAGAAGCAACAACACTGTATCTGCAGCTGCTTCGTGTTGTGGCAGCAACATGTTCAGCTGCACTATACAGACTCCCAAGGTGATTCCATTGGTGCTGTATGTATAAAGGAAATCAGAAGAAGTTTCCCCACCATTTTGCAATGcattcatttattcattcattgTCGATAGACCAGGGACCATTGCTTACAGTAACTAAAGAAACTACAACAACACAAGCTTATACCATTTTTTATTTGGGCCTCTATTGGATAAAAACAGCAATGATTAtaatttatatatttatgttttcaataataaatacattctgcttATCAAACTGTA

Function

symbol description
pdgfa Enables several functions, including platelet-derived growth factor binding activity; protein dimerization activity; and signaling receptor binding activity. Involved in several processes, including positive regulation of intracellular signal transduction; regulation of cell migration; and regulation of phosphate metabolic process. Acts upstream of or within positive regulation of cell population proliferation. Located in cell surface and extracellular space. Implicated in high grade glioma. Biomarker of Leydig cell tumor; breast cancer; leiomyoma; and prostate adenocarcinoma.

NR:

description
PREDICTED: platelet-derived growth factor subunit A isoform X3

GO: NA

KEGG:

id description
K04359 PDGFA; platelet-derived growth factor subunit A

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035620.1 False 3246 mRNA 0.46 7 58918836 58954601
XR_005035622.1 False 3504 mRNA 0.45 6 58918836 58954985
XM_036941738.1 False 3782 mRNA 0.46 6 58918836 58956165
XR_005035619.1 False 3918 mRNA 0.46 7 58918836 58956169
XR_005035621.1 True 3799 mRNA 0.45 6 58918836 58956176

Neighbor

gene id symbol gene type direction distance location
LOC118938335 NA coding downstream 239600 58675419 ~ 58679236 (-)
LOC118938334 NA coding downstream 245950 58668617 ~ 58672886 (-)
LOC110486950 NA coding downstream 252818 58624934 ~ 58666018 (-)
LOC110512346 cggbp1 coding downstream 301162 58614388 ~ 58617674 (-)
LOC110486955 NA coding downstream 314861 58588778 ~ 58603975 (-)
prkar1b prkar1b coding upstream 31723 58987899 ~ 59192472 (-)
LOC110485272 trap1 coding upstream 314421 59270597 ~ 59288845 (-)
LOC110485268 LOC106601889 coding upstream 333075 59289251 ~ 59380900 (-)
LOC110516720 adcy9 coding upstream 426650 59382826 ~ 59472065 (-)
LOC110487012 LOC106606491 coding upstream 525305 59481481 ~ 59516940 (-)
G1192075 NA non-coding downstream 21362 58893558 ~ 58897474 (-)
G1191345 NA non-coding downstream 38324 58880146 ~ 58880512 (-)
G1191333 NA non-coding downstream 55085 58863504 ~ 58863751 (-)
G1191329 NA non-coding downstream 59845 58858780 ~ 58858991 (-)
G1191326 NA non-coding downstream 63183 58855421 ~ 58855653 (-)
G1192117 NA non-coding upstream 28024 58984200 ~ 58985107 (-)
G1192118 NA non-coding upstream 33138 58989314 ~ 58989609 (-)
G1192128 NA non-coding upstream 97382 59053558 ~ 59054126 (-)
G1192136 NA non-coding upstream 114364 59070540 ~ 59070865 (-)
G1192155 NA non-coding upstream 144791 59100967 ~ 59101571 (-)
G1192082 NA other downstream 9604 58906153 ~ 58909232 (-)
G1191335 NA other downstream 49865 58868063 ~ 58868971 (-)
G1191298 LOC106606554 other downstream 156750 58759723 ~ 58762086 (-)
LOC110514412 NA other downstream 330310 58561680 ~ 58588526 (-)
G1192158 NA other upstream 163836 59119541 ~ 59121156 (-)
G1192205 NA other upstream 318965 59275141 ~ 59275849 (-)
LOC118938340 NA other upstream 1236837 60192912 ~ 60196843 (-)

Expression


Co-expression Network