LOC110485272 (trap1)


Basic Information

Item Value
gene id LOC110485272
gene name trap1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 59270597 ~ 59288845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941747.1
GTAATCTTTGTGCGACTGTGAGAGGTCCTACTTGTGCTTGCAGTTGTCGCACTTCTGTTTAACGTGTGTTGAATAGGTCAAACGACCTCTTGCTCTGTCAAAGATGTCTCGGTGCCTGAAATTGTTCAAATTCGCTTTGGGTTCTTCTCGAAGGGCCAACTCCAGGCTCCTGTCTTCTGGACGAGGATTGGGTAGTAGGACTGTAGGACCATTCAGTGAAGATGCCCATGTCAGGCAGCAGCAGAAACAATGGTCCAGAAGTGGCATGTGGAACCCCAGCCTTGGTCTCACCCAGTGTTCCTACTACAGCACCAAGGAAGCTGAGAGAGTCCCTCAGGATACAGACAAGGATCTAGAAGCTGAGAAAGCTCCTGCGACAGAGAAGGTTGAGGAAGTAGAGAATATTCAAGAGGCAGAGGATAAAGCTCCCGAAGAAGAACCCCTGCACACAATCATCCAAGACACAGAGAATGTCCAAGGCACCTTTTCCAAGCATGAGTTCCAGGCTGAGACCAAGAAACTCTTGGACATTGTTGCTAGATCTCTGTACTCTGAGAAGGAGGTGTTCATCCGTGAGCTGATCTCCAATGGCAGTGACGCCCTGGAGAAGCTGCGCCACAAGCTGATAACGGGAGGGGGAGACACGGCCCCCATGGAGATCCACCTACAGACGGACCAGGCCAAGGGCACCTTCACCATCCAGGACACAGGAGTTGGGATGAACCAAGAGGAGCTGGTGGCCAACCTGGGGACTATCGCTCGTTCTGGATCCAAGGCTTTCCTGGAGTCCCTGCAGAGCCAGGCGGAGGCCAGCAGCTCCATCATTGGTCAGTTTGGTGTGGGCTTCTACTCTGCCTTCATGGTGGCTGACCGTGTGGACGTCTACTCTCAGTCAGCCGAGCCCAGCAGCCCCGGATACAAGTGGTCCTCTGAtggGTCTGGAGTGTTTGAGATAGCTGAGGCAAGTGGGGTCAGACCAGGCACTAAGATAGTGCTGCATCTCAAGGATGACTGCAAGGAGTTCTCTGCTGAGGACAGAGTCAAAGAGGTGGTGACCAAATACAGCAACTTTGTCAGTTTCCCCGTCTTCCTGAACGGACGACGACTCAACACTCTCCAGGCCCTGTGGATGATGGAACCCAAGTCCATCAGTGAGTGGCAGCACGAGGAGTTCTACCGTTACGTGGCTCAGTCGTACGACAAGCCCCGCTACACACTGCACTACCGCGCTGACGCCCCCGTCAACATCCGCTCCATCTTCTACGTCCCAGAcgtgAAGCCGTCCATGTTTGACGTGAGCAGAGAGATGGGCTCCAGTGTGGCTCTGTACAGCAGGAAGGTTCTCATCCAGACCAAGGCCACTGAAATCCTGCCCAAGTGGCTACGCTTCCTTAGAGGTGTGGTGGACAGTGAGGATATCCCATTGAACCTGAGCAGAGAGCTGCTGCAGGAGAGCACCCTCATCAGgaaGCTGAGGGACGTTCTACAGCAGCGTATCATTAAGTTCCTGATGGACCAGAGTAAGAAGGAACCTGAGAAATACGCCAAGTTCTTTGAGGACTACGGCCTGTTCATCCGGGAGGGTATCGTCACCACGCAggagcaggacgtcaggGAGGACATCGGCAAGCTGTTGAGGTTTGAGTCTTCAGTGCTACCCGCGGGCCAGCAGACCAACCTGAAGGAGTACGGCTCCCGTATGAAGGCTGGGACACGTAACATCTACTACCTGTGTGCCCCAAACCGACACCTGGCTGAACACTCCCCCTACTTTGAGGCCATGAAGCAGAAAGACATGGAGGTGCTGTTCTGCTATGAGCAGTTTGACGAGCTCACCCTCCTGCACCTCAGAGAGTTTGACAAGAAGAAGCTGATCTCTGTGGAAACAGACATTGTGGTGGACCACTACAAGGAGGAGAAGTACCAGGACAGCAAGCCTGCCTCTGAGCGTCTGACAGAGGAGCAGACTGAGGACCTGATCTCCTGGATGAGGAACAATCTGGGAAACAGAGTCACCAACATCAAGGTGACCCCTCGTCTGGACACCCACCCAGCCATGATCACGGTGCTGGAGATGGGTGCCGCACGCCACTTCCTGCGTACCCAGCAGATGGCCCGCAGCACAGAGGAGAGGGCCCAGATACTGCAGCCCACCCTGGAGATCAACGCTGGTCATGACCTCATCAAGAAGATGCACTCACTGAAGGAGTCCGACTCTGCACTCGCACAACTGCTGCTGGAGCAGATCTACGACAACGCCATGATCGCAGCGGGCCTCAACGACGACCCCCGACCCATGATCGCCCGCCTCAACAACCTGCTGACCAGAGCGCTGGAGAAACACTGAGACGTCACGGCCGTCAACTGTAGGGCCGATACACTACAGTCACTGCCTGGTTTAACTCCCCATCTCCCCAACCAACTGTCCTACTGGTCAGGTAGGCCCTACATAGACACGTGACCTGGCTCTACATGCTGCAGATACTACCCCCATCAACAACACACGGCTCTGGTGGCCTTTCCACATTCAGGCCTGCCCATCTGTACCCCAGAAAAGTCCCTTCAATACCAACGGACTGTTGGAGGAGAGCAGGGAGGCTTCGGCCTGctcagagacctgaaaatggagTAGACGGACACGACTCAaactgtggatgtgtgtgttgctCGGACTCTCCAGCAGTGTTGACTCATGTTGTGTGTGATGACCCAGATATTTATCAGACTGTGTCATGAGCAGAGTGGAAACCCCAGATCTGAAGAATGGGTTAGGGCTTTGTAAAGGACGTCTTATTGACATTGGGACTGGTGTAATGATCGTACACATTTCCATGACGTGCAGACTTCCTAGATGACCGTTCAATACAATTGTTACTGTTGGCCCTCTTTTTTTCTTCCTATTTTAGTGTTTGTCATCTTGATTCGTgttccacatttttttttgtaccattgCTTTGTTAGGTGATATTTTCCTCCCAGCTATTCCTCAGATATAATGGTTGGCAATCCCAATATTAGAGCCATAGATTCCTGTCCTTCAGAGAATAGTATTCAAACTGACTGTAAAGACTTATTTTACAATTAGATGTGTTGCTGGGAGAAATTTGAACGAGATTGTATATTACCATCTGTGTGGAATTTGACAAATGTCTTAATTCGGTGCTCCATCCAATATTATTAGTTATCCATCCAATATTATTAGTTATATATCCAATATTATTAGTTATCCATCCAATTGTTTTTTTGTACCTGTTAACAAAGGCTGACATCGAAGAAAGAGCGCGTCTAATACTCCGATTGTAACGTATGATACTGATGTATTGTGAATAAAAGCCATTTACTGAACCCTGTG

Function

symbol description
trap1 Enables ATP hydrolysis activity; identical protein binding activity; and metal ion binding activity. Involved in nucleic acid phosphodiester bond hydrolysis. Predicted to be active in mitochondrial inner membrane. Orthologous to human TRAP1 (TNF receptor associated protein 1).

NR:

description
LOW QUALITY PROTEIN: heat shock protein 75 kDa, mitochondrial

GO: NA

KEGG:

id description
K09488 TRAP1, HSP75; TNF receptor-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941747.1 True 3352 mRNA 0.51 18 59270597 59288845

Neighbor

gene id symbol gene type direction distance location
prkar1b prkar1b coding downstream 78125 58987899 ~ 59192472 (-)
LOC100136119 pdgfa coding downstream 314421 58918836 ~ 58956176 (-)
LOC118938335 NA coding downstream 591361 58675419 ~ 58679236 (-)
LOC118938334 NA coding downstream 597711 58668617 ~ 58672886 (-)
LOC110486950 NA coding downstream 604579 58624934 ~ 58666018 (-)
LOC110485268 LOC106601889 coding upstream 406 59289251 ~ 59380900 (-)
LOC110516720 adcy9 coding upstream 93981 59382826 ~ 59472065 (-)
LOC110487012 LOC106606491 coding upstream 192636 59481481 ~ 59516940 (-)
LOC118938337 LOC105021644 coding upstream 234945 59523790 ~ 59543119 (-)
LOC110487009 LOC106601835 coding upstream 355739 59644584 ~ 59648914 (-)
G1192195 NA non-coding downstream 30378 59239969 ~ 59240219 (-)
G1192159 NA non-coding downstream 146154 59124102 ~ 59124443 (-)
G1192158 NA non-coding downstream 149441 59119541 ~ 59121156 (-)
G1192157 NA non-coding downstream 154528 59112860 ~ 59116069 (-)
G1192155 NA non-coding downstream 169026 59100967 ~ 59101571 (-)
G1192099 NA non-coding upstream 92497 59381342 ~ 59382439 (-)
G1192222 NA non-coding upstream 104911 59393756 ~ 59393961 (-)
G1192223 NA non-coding upstream 106501 59395346 ~ 59395643 (-)
G1192246 NA non-coding upstream 131340 59420185 ~ 59420419 (-)
G1192082 NA other downstream 361365 58906153 ~ 58909232 (-)
G1191335 NA other downstream 401626 58868063 ~ 58868971 (-)
G1191298 LOC106606554 other downstream 508511 58759723 ~ 58762086 (-)
LOC110486955 NA other downstream 668365 58588778 ~ 58603975 (-)
LOC118938340 NA other upstream 904168 60192912 ~ 60196843 (-)
G1192519 NA other upstream 916937 60205782 ~ 60208270 (-)
G1192535 NA other upstream 930321 60219166 ~ 60314554 (-)

Expression


Co-expression Network