Gene
RNA
| Item | Value |
|---|---|
| gene id | G1161822 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 29177298 ~ 29177894 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1324983 | False | 353 | lncRNA | 0.40 | 1 | 29177298 | 29177650 |
| TU1324980 | True | 441 | lncRNA | 0.40 | 1 | 29177454 | 29177894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rrp36 | rrp36 | coding | upstream | 4777 | 29168401 ~ 29172521 (+) |
| LOC110486062 | LOC106585334 | coding | upstream | 316693 | 28859535 ~ 28860605 (+) |
| LOC110485131 | LOC106571816 | coding | upstream | 402358 | 28768216 ~ 28774940 (+) |
| LOC118938260 | LOC106593417 | coding | upstream | 423819 | 28751512 ~ 28753479 (+) |
| LOC118938259 | LOC106566139 | coding | upstream | 455562 | 28716818 ~ 28721736 (+) |
| si:ch211-126j24.1 | LOC106585260 | coding | downstream | 88724 | 29266618 ~ 29370947 (+) |
| LOC110486069 | klc4 | coding | downstream | 195407 | 29373301 ~ 29409473 (+) |
| LOC110486070 | hebp1 | coding | downstream | 241469 | 29419363 ~ 29436445 (+) |
| LOC110486071 | LOC106564807 | coding | downstream | 266229 | 29444123 ~ 29485813 (+) |
| LOC110486072 | LOC106585018 | coding | downstream | 320168 | 29498062 ~ 29591905 (+) |
| G1161768 | NA | non-coding | upstream | 3872 | 29172755 ~ 29173426 (+) |
| G1161821 | NA | non-coding | upstream | 12061 | 29165036 ~ 29165237 (+) |
| G1161592 | NA | non-coding | upstream | 318192 | 28858872 ~ 28859106 (+) |
| G1161567 | NA | non-coding | upstream | 335701 | 28841377 ~ 28841597 (+) |
| G1161564 | NA | non-coding | upstream | 337615 | 28838493 ~ 28839683 (+) |
| G1161823 | NA | non-coding | downstream | 1196 | 29179090 ~ 29179331 (+) |
| G1161825 | NA | non-coding | downstream | 4182 | 29182076 ~ 29182279 (+) |
| G1161833 | NA | non-coding | downstream | 17722 | 29195616 ~ 29195821 (+) |
| G1161837 | NA | non-coding | downstream | 20390 | 29198284 ~ 29198533 (+) |
| G1161893 | NA | non-coding | downstream | 104996 | 29282890 ~ 29283116 (+) |
| G1159924 | NA | other | upstream | 357850 | 28818734 ~ 28819448 (+) |
| LOC110513252 | NA | other | upstream | 478477 | 28338501 ~ 28698821 (+) |
| LOC110487355 | LOC106561190 | other | upstream | 678092 | 28472333 ~ 28500669 (+) |
| G1159684 | NA | other | upstream | 919324 | 28252530 ~ 28257974 (+) |
| G1159631 | NA | other | upstream | 1051660 | 28119665 ~ 28125638 (+) |
| G1161908 | NA | other | downstream | 120864 | 29298758 ~ 29299656 (+) |
| G1162364 | NA | other | downstream | 316468 | 29494362 ~ 29494902 (+) |
| G1162753 | NA | other | downstream | 652860 | 29830754 ~ 29831296 (+) |
| LOC110486104 | chchd5 | other | downstream | 1936417 | 31113781 ~ 31119681 (+) |
