G1161823


Basic Information

Item Value
gene id G1161823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 29179090 ~ 29179331 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1324987
tgggagaaactccccaactacaggtgtgtcaagcttgtagcgtcatacccaagaagactcaaggctgtaatctctgccaaaggtgcttcaacaaagtactgagtgaagtgtctgaatgcttatgtaaatgtcacTTTTGATTTATTTGTATAAATTCGCAAAAAtggctaaaaacctgtttttgatatgtcatgaggtattgtgtgtagattgaagaggaataaaaacaatttaatcaattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1324987 True 242 lncRNA 0.36 1 29179090 29179331

Neighbor

gene id symbol gene type direction distance location
rrp36 rrp36 coding upstream 6569 29168401 ~ 29172521 (+)
LOC110486062 LOC106585334 coding upstream 318485 28859535 ~ 28860605 (+)
LOC110485131 LOC106571816 coding upstream 404150 28768216 ~ 28774940 (+)
LOC118938260 LOC106593417 coding upstream 425611 28751512 ~ 28753479 (+)
LOC118938259 LOC106566139 coding upstream 457354 28716818 ~ 28721736 (+)
si:ch211-126j24.1 LOC106585260 coding downstream 87287 29266618 ~ 29370947 (+)
LOC110486069 klc4 coding downstream 193970 29373301 ~ 29409473 (+)
LOC110486070 hebp1 coding downstream 240032 29419363 ~ 29436445 (+)
LOC110486071 LOC106564807 coding downstream 264792 29444123 ~ 29485813 (+)
LOC110486072 LOC106585018 coding downstream 318731 29498062 ~ 29591905 (+)
G1161822 NA non-coding upstream 1196 29177298 ~ 29177894 (+)
G1161768 NA non-coding upstream 5664 29172755 ~ 29173426 (+)
G1161821 NA non-coding upstream 13853 29165036 ~ 29165237 (+)
G1161592 NA non-coding upstream 319984 28858872 ~ 28859106 (+)
G1161567 NA non-coding upstream 337493 28841377 ~ 28841597 (+)
G1161825 NA non-coding downstream 2745 29182076 ~ 29182279 (+)
G1161833 NA non-coding downstream 16285 29195616 ~ 29195821 (+)
G1161837 NA non-coding downstream 18953 29198284 ~ 29198533 (+)
G1161893 NA non-coding downstream 103559 29282890 ~ 29283116 (+)
G1161894 NA non-coding downstream 105303 29284634 ~ 29284917 (+)
G1159924 NA other upstream 359642 28818734 ~ 28819448 (+)
LOC110513252 NA other upstream 480269 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other upstream 679884 28472333 ~ 28500669 (+)
G1159684 NA other upstream 921116 28252530 ~ 28257974 (+)
G1159631 NA other upstream 1053452 28119665 ~ 28125638 (+)
G1161908 NA other downstream 119427 29298758 ~ 29299656 (+)
G1162364 NA other downstream 315031 29494362 ~ 29494902 (+)
G1162753 NA other downstream 651423 29830754 ~ 29831296 (+)
LOC110486104 chchd5 other downstream 1934980 31113781 ~ 31119681 (+)

Expression


Co-expression Network