Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183592 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49439151 ~ 49439353 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106613574, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349829 | True | 203 | lncRNA | 0.44 | 1 | 49439151 | 49439353 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kcnh2 | kcnh2 | coding | downstream | 9800 | 49388158 ~ 49429351 (-) |
| LOC110486683 | ccdc47 | coding | downstream | 69292 | 49365418 ~ 49369859 (-) |
| setd1a | LOC106585476 | coding | downstream | 77917 | 49346540 ~ 49361234 (-) |
| hsd3b7 | hsd3b7 | coding | downstream | 99294 | 49326722 ~ 49339857 (-) |
| LOC110486679 | LOC106601593 | coding | downstream | 126162 | 49300153 ~ 49312989 (-) |
| LOC100136168 | LOC106585555 | coding | upstream | 8889 | 49448242 ~ 49456279 (-) |
| LOC110486686 | map3k3 | coding | upstream | 28413 | 49467766 ~ 49485525 (-) |
| LOC110486687 | LOC106601611 | coding | upstream | 47464 | 49486817 ~ 49504819 (-) |
| LOC110486688 | LOC106601605 | coding | upstream | 75697 | 49515050 ~ 49522522 (-) |
| LOC110486692 | LOC106606873 | coding | upstream | 91418 | 49530771 ~ 49533590 (-) |
| G1183590 | NA | non-coding | downstream | 3170 | 49435768 ~ 49435981 (-) |
| G1183588 | NA | non-coding | downstream | 5980 | 49432937 ~ 49433171 (-) |
| G1183297 | NA | non-coding | downstream | 113624 | 49325027 ~ 49325527 (-) |
| G1183567 | NA | non-coding | downstream | 121668 | 49317282 ~ 49317483 (-) |
| G1183273 | NA | non-coding | downstream | 139287 | 49295176 ~ 49299864 (-) |
| G1183595 | NA | non-coding | upstream | 5011 | 49444364 ~ 49444722 (-) |
| G1183604 | NA | non-coding | upstream | 22139 | 49461492 ~ 49461846 (-) |
| G1183605 | NA | non-coding | upstream | 23146 | 49462499 ~ 49462737 (-) |
| G1183609 | NA | non-coding | upstream | 34079 | 49473432 ~ 49473756 (-) |
| LOC110485205 | LOC106597701 | other | downstream | 461743 | 48959315 ~ 49053966 (-) |
| LOC110486656 | syt3 | other | downstream | 502694 | 48875671 ~ 48936482 (-) |
| G1183337 | NA | other | downstream | 771069 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 968168 | 48435826 ~ 48470983 (-) |
| LOC118938314 | NA | other | upstream | 97846 | 49537199 ~ 49544276 (-) |
| G1183706 | NA | other | upstream | 245985 | 49685338 ~ 49688456 (-) |
| LOC110486698 | LOC106601594 | other | upstream | 396310 | 49831067 ~ 49853671 (-) |
| G1184986 | NA | other | upstream | 1187294 | 50626647 ~ 50628539 (-) |
