G1186216


Basic Information

Item Value
gene id G1186216
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52010690 ~ 52011211 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352758
AACTCTGAGTCCtggagagtagagaagagcaaCCGCCACCAGTTCAGCTTCAACACAAACCATGTACCCTGCATCTCTACTGCTGATGCTGGCAGCTGCCtcctGTGTTCACTGTGAAGAACTCACTCAGCCAGCCTCTATGACTGTCCAGTCAGGTCAACCACTGACCATCTCTTGTAAGGTTTCATATTCTGTAGGTAGCTATTACACAGCTTGGATCCGGCAGCCTGCAGGGAAAACACTGGAGTGGATTGGAATGAAATATACTGGAGGAACGCACCACAAAGACTCCCTGAAAAATAAGTTCAGCCTCACAGTAGACTCCTCCAGCAATACTGTGACTTTAACAGGACAGAGTCTGCAGACTGAGGACACAGCTGTGTATTATTGTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352758 True 393 TUCP 0.48 2 52010690 52011211

Neighbor

gene id symbol gene type direction distance location
LOC110486749 LOC106601716 coding downstream 403688 51592159 ~ 51607002 (-)
LOC110486760 LOC101074561 coding downstream 425099 51581861 ~ 51585591 (-)
carm1 carm1 coding downstream 429485 51566960 ~ 51581205 (-)
timm29 LOC106606779 coding downstream 448225 51559667 ~ 51562465 (-)
LOC118938317 NA coding downstream 479929 51526614 ~ 51530761 (-)
LOC118938556 NA coding upstream 89674 52100885 ~ 52101957 (-)
LOC110485216 NA coding upstream 144429 52155640 ~ 52331576 (-)
LOC110538721 NA coding upstream 175346 52186557 ~ 52189703 (-)
LOC110486769 gtf2f1 coding upstream 404108 52415319 ~ 52430034 (-)
LOC110486776 LOC106606809 coding upstream 719167 52730378 ~ 52741555 (-)
G1186398 NA non-coding downstream 33339 51971697 ~ 51977351 (-)
G1186217 NA non-coding downstream 80840 51929208 ~ 51929850 (-)
G1186348 NA non-coding downstream 136661 51869298 ~ 51874029 (-)
G1186082 NA non-coding downstream 159702 51837324 ~ 51850988 (-)
G1186283 NA non-coding downstream 196222 51742464 ~ 51814468 (-)
G1186438 NA non-coding upstream 82149 52093360 ~ 52093778 (-)
G1186446 LOC106601675 non-coding upstream 94578 52105789 ~ 52106669 (-)
G1186457 NA non-coding upstream 101437 52112648 ~ 52112958 (-)
G1186460 NA non-coding upstream 106227 52117438 ~ 52117650 (-)
G1186467 NA non-coding upstream 131686 52142897 ~ 52144110 (-)
G1186154 NA other downstream 520449 51489777 ~ 51490241 (-)
G1186075 NA other downstream 636736 51352309 ~ 51373954 (-)
G1186080 NA other downstream 686759 51321800 ~ 51323931 (-)
G1185046 NA other downstream 1228832 50780265 ~ 50781858 (-)
LOC110485208 LOC106606837 other downstream 1252646 50732097 ~ 50824433 (-)
G1186670 LOC100194703 other upstream 648120 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 1595813 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 1795433 53806640 ~ 54049592 (-)
G1188147 NA other upstream 2437672 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 2454322 54409911 ~ 54470838 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000288_00002154_00002467 NA coding CI01000288 null 2154 ~ 3463 (+)
eurasian perch (Perca fluviatilis) trnar-ucg_4 NA coding NC_053118.1 CM020915.1 22024 ~ 22096 (-)
tiger barb (Puntius tetrazona) LOC122332140 ighm,ighv5-5,ighv5-4,ighv5-8 coding NC_056701.1 CM032070.1 13086375 ~ 13087267 (-)