timm29 (LOC106606779)


Basic Information

Item Value
gene id timm29
gene name LOC106606779
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51559667 ~ 51562465 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558574.2
taaactagctagctaatggtgTTAATTTCAACCACGGTGCACTAAATTCACATTATCACTCGCCTGTTCCACGTCACCTTATGTACACAACCATCCTGTGTTGGCTCAAGACGGATCATCGTGTTCACGTGACCAGTCCGAATGTGAACTTCCGGAACGATCGGCTTCTGTCTGACGAACATGGCTGCCTCGTGGGTGCTCAGGAGATGGTGCTCCACCTCTATAGCAGAAGCAGGAGCAGCACCCGTCAATGGCACCCGATGGAAGAGGTTGAAAAATAGCAAATTGGGTGTGTGGTTTAGCGGCATGTCCAGAGACTACAAGGAGGCGTGTCGTGAGATTGTGGTGGGCGCGTGGGAGAGGCCAATCAAAGCTTCCATCTACCTGAGCCTTCTGGGTGGAGCCGGCACCTGCATCTACACAAACCCCGACGACGCCTCTTTCGAGACCACCGTCCTGGATACAGCCAATCAGCTCGGGCTCCTGACGCCGTGGATACGCAGTGGAACATCGGATGGGCACGTGCAGAAGCTGACGAAGCTTCGTAACGAGGGAAGGTTACGTCACCTCAGCCTGGGAGTGGTCTCACTCACCTACTTCGCCGATTACAACCCGGACGCCAGTCTTTACGAGGCCCAGTGCTCCAACCTCTCTATCCCCTGGAGGGAGCTCCACACGCGGGTACTGGACGTTGGCTTCGCGGGTCGCTGGTGGATCCTGGACCATAAGATGAAGGACTATGATGTGAACGATGAAGAGTTCAAGCACCTGCCGCCTGCTATGGCCGCCACAGTGCCCCCTGGTGTCCAGGGGGTGGAGAATAACGAGAGGCTGCACAAAGAGTCATGGATGCCTCTGAAGacggaggagaatgaggagaaggaAAAGGCATCGGCAGccgtagaggaggaggggggcatTGTAGAACAGATAAAGATGGACAGTTTAGATCTTGTAGaaacaataaaaataaagacAGGCATTGTAGCTCAACCACAGGAGATAGCTGACCCAGAACCACAGGAGCTACCTGACCCAGAACCACAGGAGCTACCTGACCCAGAACCACAGGAGCTGACGCTGACAGAGACGGAGACACAGGAGTAGCAGACACAAGCTCAAGCAAAGGCCTAATGTGTCATGGACCAATGGACTCACACTAGCAGGACAATGACTGCTGGACACATAATGAGATGGCTGAACAAGAATCTCTAAAAGGACATATTTATTGGATGTTGACAAGATGATATGTGTGTATAAGAGTACCTTCCGCACTGTTTAACGTGTTATATAGCGCCCAAGCCTATTAACACTCTGGACTATAGCTACACATGACATGATGTTAAAGGGTCTCCTTTATAGAATATATTACTGTTAACAGTTTATTAATGATACTGATTTGGTATGTAGTGCTCTATACTGAGATGTGATAATTGATGCCATGGTCAGCAACCGAGATTCTCTAAACAGCCACTACAAACTTCAAATAACTTGATATTCTCTGGCACTTTTGAATTcattttagccagtagttctgaaagtagagcTCACGAGCTAAAAGTGGTCCCCGGAAATGGCGTACTACGTCACATGTGCACCATgtcattgctctcgctctgctgtgtgcATCTTGTTAGCTGCCACTCAAATGGtaaggggctgaagctcattagCTAGAACTAGAATTGTTAGGGGGCTGGCCCAGGTGGGGGAAAATGTAGGAGAATGGCGAAGCACAGCTTCCAGGAAAACagttgctttcaaactagggatttcgtggTTAATTGAGGTGAAACAGTAATTGTGCTCATAGATTATGcctgtatgaactacacattgacacatccagcccaaagcgggaggtttaaaaaatatttagaaGTCGCCAAAGTTCCGGAGCACGTCTTTAACAATACAATAAACCTCCTCTAAATGGTCTGGATTTATTCATTATGAATTATTGTCTAATTAAAGTACTATTGGAATGAATTTGAA

Function

NR:

description
mitochondrial import inner membrane translocase subunit Tim29-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558574.2 True 1995 mRNA 0.48 3 51559667 51562465

Neighbor

gene id symbol gene type direction distance location
LOC118938317 NA coding downstream 28906 51526614 ~ 51530761 (-)
LOC118938316 NA coding downstream 36970 51518910 ~ 51522697 (-)
LOC110486743 LOC106601710 coding downstream 51016 51470090 ~ 51508651 (-)
LOC110486742 NA coding downstream 94849 51442887 ~ 51464818 (-)
LOC110486741 erf3b coding downstream 117961 51427685 ~ 51441706 (-)
carm1 carm1 coding upstream 4495 51566960 ~ 51581205 (-)
LOC110486760 LOC101074561 coding upstream 19396 51581861 ~ 51585591 (-)
LOC110486749 LOC106601716 coding upstream 29694 51592159 ~ 51607002 (-)
LOC118938556 NA coding upstream 538420 52100885 ~ 52101957 (-)
LOC110485216 NA coding upstream 593175 52155640 ~ 52331576 (-)
G1186189 NA non-coding downstream 6035 51553418 ~ 51553632 (-)
G1186183 NA non-coding downstream 15308 51544056 ~ 51544359 (-)
G1186182 NA non-coding downstream 18249 51541002 ~ 51541418 (-)
G1186175 NA non-coding downstream 26129 51533291 ~ 51533538 (-)
G1186214 NA non-coding upstream 63197 51625662 ~ 51626441 (-)
G1186085 NA non-coding upstream 65266 51627731 ~ 51628433 (-)
G1186222 NA non-coding upstream 68323 51630788 ~ 51653059 (-)
G1186224 NA non-coding upstream 69229 51631694 ~ 51649513 (-)
G1186154 NA other downstream 69426 51489777 ~ 51490241 (-)
G1186075 NA other downstream 185713 51352309 ~ 51373954 (-)
G1186080 NA other downstream 235736 51321800 ~ 51323931 (-)
G1185046 NA other downstream 777809 50780265 ~ 50781858 (-)
LOC110485208 LOC106606837 other downstream 801623 50732097 ~ 50824433 (-)
G1186381 NA other upstream 362498 51924963 ~ 52030660 (-)
G1186216 NA other upstream 448225 52010690 ~ 52011211 (-)
G1186670 LOC100194703 other upstream 1096866 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 2044559 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 2244179 53806640 ~ 54049592 (-)

Expression


Co-expression Network