Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190206 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 57034621 ~ 57034925 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106581772, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1357565 | True | 305 | lncRNA | 0.59 | 1 | 57034621 | 57034925 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486860 | tom1l2 | coding | downstream | 26631 | 56960592 ~ 57007990 (-) |
| LOC110486859 | srebf1 | coding | downstream | 76975 | 56911365 ~ 56957646 (-) |
| LOC110515093 | LOC106606674 | coding | downstream | 783696 | 56226179 ~ 56250925 (-) |
| LOC110539043 | LOC106601829 | coding | downstream | 830811 | 56125290 ~ 56203810 (-) |
| LOC110485237 | LOC106606659 | coding | downstream | 923650 | 56088292 ~ 56110984 (-) |
| LOC110486894 | LOC106601810 | coding | upstream | 19528 | 57054453 ~ 57085521 (-) |
| nduba | LOC106601814 | coding | upstream | 59387 | 57094312 ~ 57099778 (-) |
| LOC110485244 | LOC106601809 | coding | upstream | 77984 | 57112909 ~ 57129442 (-) |
| LOC110486881 | LOC106606582 | coding | upstream | 127050 | 57161975 ~ 57164019 (-) |
| LOC110516439 | LOC106601803 | coding | upstream | 140071 | 57174996 ~ 57189319 (-) |
| G1190204 | NA | non-coding | downstream | 4922 | 57029429 ~ 57029699 (-) |
| G1190186 | NA | non-coding | downstream | 25799 | 57008601 ~ 57008822 (-) |
| G1190180 | NA | non-coding | downstream | 41823 | 56992337 ~ 56992798 (-) |
| G1190175 | NA | non-coding | downstream | 75713 | 56958708 ~ 56958908 (-) |
| G1190215 | NA | non-coding | upstream | 22001 | 57056926 ~ 57057224 (-) |
| G1190217 | NA | non-coding | upstream | 27176 | 57062101 ~ 57062336 (-) |
| G1190219 | NA | non-coding | upstream | 28694 | 57063619 ~ 57064662 (-) |
| G1190221 | NA | non-coding | upstream | 31576 | 57066501 ~ 57066837 (-) |
| G1189660 | LOC106601786 | other | downstream | 360383 | 56670293 ~ 56674238 (-) |
| G1189279 | LOC106601786 | other | downstream | 1118736 | 55912224 ~ 55915885 (-) |
| LOC110485238 | LOC106601829 | other | downstream | 1579387 | 55434816 ~ 55509918 (-) |
| LOC110516592 | LOC106601772 | other | downstream | 1821906 | 55209614 ~ 55242150 (-) |
| G1190199 | LOC106601813 | other | upstream | 54246 | 57089171 ~ 57089915 (-) |
| G1190405 | NA | other | upstream | 461063 | 57495988 ~ 57499155 (-) |
| LOC110486915 | LOC106606556 | other | upstream | 664326 | 57698059 ~ 57706813 (-) |
| G1190628 | NA | other | upstream | 931212 | 57964952 ~ 57994099 (-) |
