G1190219


Basic Information

Item Value
gene id G1190219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57063619 ~ 57064662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1357580
CCTTTGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTTGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTTGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTTGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAACTGGGCATTAAAACATCCTTCGCCTTCAATACAGATATCAACTGGGCATTAAAACATCCTTTAGTACAGATATCAACTGGGCATTAAAACATCCTTTAGTACAGATATCAACTGGGCATTAAAACATCATTTAGTACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTTAGTACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAACTGGGCATTAAAACATCATTTAGTACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCGATACAGATATCAACTGGGCATTAAAACATCCTTCACCTTCAATACAGATATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1357580 True 933 lncRNA 0.37 2 57063619 57064662

Neighbor

gene id symbol gene type direction distance location
LOC110486860 tom1l2 coding downstream 55629 56960592 ~ 57007990 (-)
LOC110486859 srebf1 coding downstream 105973 56911365 ~ 56957646 (-)
LOC110515093 LOC106606674 coding downstream 812694 56226179 ~ 56250925 (-)
LOC110539043 LOC106601829 coding downstream 859809 56125290 ~ 56203810 (-)
LOC110485237 LOC106606659 coding downstream 952648 56088292 ~ 56110984 (-)
nduba LOC106601814 coding upstream 29650 57094312 ~ 57099778 (-)
LOC110485244 LOC106601809 coding upstream 48247 57112909 ~ 57129442 (-)
LOC110486881 LOC106606582 coding upstream 97313 57161975 ~ 57164019 (-)
LOC110516439 LOC106601803 coding upstream 110334 57174996 ~ 57189319 (-)
LOC118936526 LOC106606576 coding upstream 543358 57598591 ~ 57612663 (-)
G1190217 NA non-coding downstream 1283 57062101 ~ 57062336 (-)
G1190215 NA non-coding downstream 6395 57056926 ~ 57057224 (-)
G1190206 NA non-coding downstream 28694 57034621 ~ 57034925 (-)
G1190204 NA non-coding downstream 33920 57029429 ~ 57029699 (-)
G1190186 NA non-coding downstream 54797 57008601 ~ 57008822 (-)
G1190221 NA non-coding upstream 1839 57066501 ~ 57066837 (-)
G1190225 NA non-coding upstream 11754 57076416 ~ 57077150 (-)
G1190191 NA non-coding upstream 26028 57090690 ~ 57092938 (-)
G1190242 NA non-coding upstream 87625 57152287 ~ 57152702 (-)
G1190243 NA non-coding upstream 88044 57152706 ~ 57152967 (-)
G1189660 LOC106601786 other downstream 389381 56670293 ~ 56674238 (-)
G1189279 LOC106601786 other downstream 1147734 55912224 ~ 55915885 (-)
LOC110485238 LOC106601829 other downstream 1608385 55434816 ~ 55509918 (-)
LOC110516592 LOC106601772 other downstream 1850904 55209614 ~ 55242150 (-)
LOC110486894 LOC106601810 other upstream 16155 57054453 ~ 57085521 (-)
G1190199 LOC106601813 other upstream 24509 57089171 ~ 57089915 (-)
G1190405 NA other upstream 431326 57495988 ~ 57499155 (-)
LOC110486915 LOC106606556 other upstream 634589 57698059 ~ 57706813 (-)
G1190628 NA other upstream 901475 57964952 ~ 57994099 (-)

Expression


Co-expression Network