XLOC_031784 (phospho2)


Basic Information

Item Value
gene id XLOC_031784
gene name phospho2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 3710865 ~ 3713097 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062265
TTCCAGTGCAGAATGAAGACCTTAGTAGTGTTCGACTTCGATCACACTATAGTGGATGAAAACAGCGACACTTGGGTGATCCGCTGCACCCCCGACCAGAAGTTACCGGACTGGCTGGAGAAGTCCTACCAGAGGGGCAGGTGGACCGAATATATGGGTCGAGTGTTGACCTACATCGGAGACCAGTCCGTCCGGCCGGAGCACATGCGCGCGGTCATGGAGAGCATCCCGTTCACCGACGGCATGACCGAGCTCCTGACCTTCATATCCGAGAATAAGAAGCACATCGACTGCATTATCATCTCCGACTCGAACACTTTATTCATAGACTGGGCTTTGCAGGCGTCGGGGTTGAAATCCGCAGTAGATGACGTCTTCAGCAACCCCGCGAACATCGATGCGCGCGGGTACGTGAGCTTGCGCTGCTTCCACGCGCATGCCTGTAAAGAGTGTCCGGTAAACCTGTGCAAGAGAAGGGTGCTGCGGGATTTCACGGAGAACCGGGCGAAAGATGGCCTGCGTTATGAGCGGATTTGCTATATAGGAGACGGAGGAAACGACTTTTGCCCTGTTAAAGAGCTGACAGAGGGCGACATTGCAATGCCAAGGAAAGGATTCACCCTGGAGAAACTGTTGCGCAAAGGCATTTCTGAGGGTTCAAACGAGCTCAGGGCCAAAATTATGCCCTGGACTAGTGCCAAAGAAATCCTTCAGGAATTAAGAGCTCTAATTGAGTGATATATAGTGTTATGAGCAATATCGTGAGATTCCGACACGATTATTGAAAGCGTCCGTCAAACAACTTGATTAGGTAACTTGGGTGTTTTGGTAACGTAACGCTTTACAATGAGGTCTTCATTGAATGCATTCACTAATATGTAAACAATTATCAGCAATTATTAACCTTTACAAATGCTACTtcactgtgcattaactaatgttgatctttaaaaaaaacatatgtaaatGTTGAGATTATAACAGATTCATATTTTTGTGAGATAGATTTACATATAAACGTATGGATttatatatagattatatataaATTCATCCTCAAACTACTTGATAAAATTACTTGAGTATaaagtaatgtctgtatattggtaacactttacaataaggtctcTCCTTCATTGAATGCATTCACTAATATGTAATCAACTCTCCTACTTTGCATttgggttgcacggtttaccggtagaactatggtagtatcgcgatactatggctccaaaatactggcgatGCTACTGTAGTTTGCGAAAGGTGGTATCGTGATTAATAGTTTATCTACAATTAATAACGTTGCATGTGGAAAAGACACTAAAAAGATCACTCGTTTGCGCAACAATAGACCACTTTATTTTtatagtctgtggagccctttaaggttgcaaaactgtagAATTGGCGCCTTTTATGGTAGCGTATTGCATGTTTTCTAACACATCAGTTCGAACGCACATctgttcatttctgttcctgttaatatgatttagtagctacttCAACCGCGACTCTCTTTAAAAGAAAGACTCACAAAgggaaattttgaattactttggattgttacctgataagactgaaaaaaatatatagatgaaaacccaaaatagcaacaggaaacaatttttgaccacttcatttggcctaattttgttggaaaaatgctctttttttgtaacaaatttcatttggtataatttgtatctttattttaatgtattttttgttgtaagTGAGGTGCAGATAATACTTTTTGTTCTTAAGGGAATCATGCATCAAATTCAAGTAagcctattataacataaaaaaagatatttcttgtcattttctttataatttcagTTATGAATTACGGTATCGCAATACAACTTGGTATTGTGATACTTTAGCTGGTTTAGTATCGTAAGATTAACTAATGGTATAGCGACAACCCTACTTTGCATTCACTATTGCTGACAAACACCACTCTCGATCTTAAAAACATATGTAAATGTTGAGATTATAACAGATTAATAATTTTGTgagatttatatatacagttgaagtcagaattattagcctcccttttgaacttatttctcttttttaaatatttcccaaatgatgtttaacagagcaaggacattttcacagtatgtttctATTTTTGAtatatgattatattttttcttctggaaaaagtcttatttgttttatttcagctcaaataaaagcagtttttaat

Function

symbol description
phospho2 Predicted to enable phosphatase activity. Orthologous to human PHOSPHO2 (phosphatase, orphan 2).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0046872 metal ion binding molecular_function
GO:0016791 phosphatase activity molecular_function

KEGG:

id description
ko00750 Vitamin B6 metabolism
ko01009 Protein phosphatases and associated proteins

ZFIN:

id description
ZDB-GENE-080204-104 Predicted to enable phosphatase activity. Orthologous to human PHOSPHO2 (phosphatase, orphan 2).

Ensembl:

ensembl_id ENSDARG00000102202

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062265 True 2233 mRNA 0.38 1 3710865 3713097

Neighbor

gene id symbol gene type direction distance location
XLOC_031783 ppig coding upstream 2479 3693441 ~ 3708386 (+)
XLOC_031782 klhl41b coding upstream 18585 3680651 ~ 3692280 (+)
XLOC_031781 col28a2b coding upstream 35068 3640381 ~ 3675797 (+)
XLOC_031780 NA coding upstream 129574 3575051 ~ 3581291 (+)
XLOC_031779 faah coding upstream 170598 3516695 ~ 3540267 (+)
XLOC_031785 ssb coding downstream 3569 3716666 ~ 3728694 (+)
XLOC_031786 NA coding downstream 17746 3730843 ~ 3813374 (+)
XLOC_031787 NA coding downstream 102952 3816049 ~ 3826125 (+)
XLOC_031788 gad1b coding downstream 114654 3827751 ~ 3863452 (+)
XLOC_031789 gorasp2 coding downstream 150943 3864040 ~ 3875115 (+)
XLOC_031776 NA non-coding upstream 288132 3419776 ~ 3422733 (+)
XLOC_031773 BX255959.1 non-coding upstream 545143 3165608 ~ 3165722 (+)
XLOC_031771 NA non-coding upstream 1090527 2617389 ~ 2620338 (+)
XLOC_031770 LO018168.1 non-coding upstream 1117365 2519973 ~ 2593500 (+)
XLOC_031790 NA non-coding downstream 164575 3877672 ~ 3879215 (+)
XLOC_031792 CU914157.1 non-coding downstream 288220 4001317 ~ 4004456 (+)
XLOC_031798 NA non-coding downstream 805061 4518158 ~ 4520247 (+)
XLOC_031802 NA non-coding downstream 1485172 5198269 ~ 5399444 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000024_07413462_07414187 PHOSPHO2 coding CI01000024 null 7413086 ~ 7414187 (-)