LOC110493418 (LOC106564347)


Basic Information

Item Value
gene id LOC110493418
gene name LOC106564347
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13378175 ~ 13380398 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567674.2
gagagagagagagagagagagagagagagagagagagagagaggtggttttTGGGCCACATGGCTTGGTTGTCAGTGAGAGTGTGTACtgcaacagacagacacacagagagccaaAGTGTGGTCGTGGACCTAAGGACTTCAAACTTGACCATCGGAAGACAAACCAGGTGACTGGACCGGATTATATTGGATCATTACATGATATTACATACTGGGATTATGACAAACCCAAAGGTAACTCCCAGATGAGAATGTTTACTGTACTGTTCCGTCCAAGAGAAGAAAAGCTCTGACAGAGACTGAAAGAGTCCTCAGAAGAGGAACAGGTTGGCCGGCTCTTTTGAATTCAGCAGCTGGATGTAAATACTGGATTTTAATGAATGTCCAGTATTCAAAGACTCAAGAAATACATATATTATGTGTCAATTTTCTAAGGATTCAAATACGTATCAGAGGActgacaaaatatatatataaggaCACGAGAAATATATGGACTCAAGAAGATATTCTGACTACACAAGAGTGTGTCCTTTAGATGTGTCTGAACAGTGGATCAGTCCGAGCTTCTCTACACACACGTGATCCAGAGAGCGTTTCACCCACGAGGGACGGCTGCGTTCTgacctgttttctttgtgacatACCGTGAGTCGCCGACACATAAATAGAGACCCAGAAAATACCCAGAGTCCCTAGCGTCCCGGCAGAAACAGCAGAGCGAGAAGCAACCACGCACACTCACGCACAAACACACCTGGTTCATGAGTCGATACATTCAAGACTTGCTTTGTGTCGTGACGTTTTCCACTTCATCCTACTCCAGTATAGGACAGACACCCCCTTAACCCACAAACTCTcccctctgacctctaacccttgacctctgacccctgatcTCTGAACCCTGACATCTGAACCCTGACTCCTGACTATGAGCCCTCAGGGGGGTCAGTACCTCAACAAGGCAGCGGTCTTCTCCTCGCTTGGCGCCGCCCGCCTCTCCCAGCTGGCCCTGGGCTGCTCAGTGGTCGCCATGGTGAGCCACAGTGCGGGCTACAGCGGAGGGTCGTACGGCGTGTTCTGCATGGCGGTGTGGTGCGCGTGCTTCGGCATGACGACAGTGGTGTTCTTCCTGGACGCCACCCGTCTCCACGCCTGTCTGCCCGTCTCCTGGGATAACCTGACGGTGGCATTCGCCGCCGTGGCGACCCTCGTgtaTGTGACAGCCTCGGTGGTTTACCCAGTCTACTTTGTCAGAGCAGAGTGCCCCTACGGAGGCTGTGAGGTCCGGAACTTCCGCATCGCCGTCACTGTCTGCTCCATCGCCGGCTCCCTGTCCTACGGGGCCGAGGTGATCCTCTCGCGGGCCAAACCAGGCCGGGTCGTGGGCTACATGGCAACCGTCTCCGGCCTCCTCAAGGTCGTCCAGGGCTTCGTGGCGTGCATTATCTTCGGAGCGCTGGCGAACGGGACCGAGTATTCACGTCACGTAGCGACGATTTACTGCGTGGTCGTCTACGCCGTCTGCTTCGCCATGACGACTGTCGTGGTTATATTGACAGTGTCCGGTCGCACCGGGTGTCTGAAGTTACCGTTCGACcggtttgttgttgtttacacgcTCTTGGCGGTTCTCCTCTACCTCAGCGCCTCCGTCGTCTGGCCCGTGTTCTGCTTCGACAGGAAGTACGGATCGCCAGAGCGCCCGTCGTCATGCCCGCGGGGCCGGTGTCCGTGGGATAGTAAGGTGGTCGTTGCAGTGTTTAGCTTCGTCAACCTGGCGCTGTATGTCGCCGACCTGGTGTACTCACAACGGATACGTTTCATAACCCAGCAACCACGGGTGTAGAACAGAATGGgacggaacagaacagaacagaatgggacggaacagaacagaacagaatgggacggaacagaacagaacagaatgggacggaacagaacagaacagaatgggacggaacagaacagaaca

Function

NR:

description
myeloid-associated differentiation marker-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567674.2 True 1983 mRNA 0.53 2 13378175 13380398

Neighbor

gene id symbol gene type direction distance location
LOC110493417 LOC106564349 coding downstream 7466 13346096 ~ 13370709 (-)
LOC110485496 LOC106592261 coding downstream 38470 13303807 ~ 13339705 (-)
LOC110485492 LOC106592221 coding downstream 77646 13286956 ~ 13300529 (-)
LOC110485494 LOC106591833 coding downstream 91881 13280562 ~ 13286294 (-)
pcyt2 pcy2 coding downstream 123326 13222056 ~ 13254849 (-)
tmc6b LOC106593098 coding upstream 79223 13459621 ~ 13501211 (-)
LOC118940038 NA coding upstream 79784 13460182 ~ 13460723 (-)
LOC118940028 kith coding upstream 191813 13572211 ~ 13576259 (-)
LOC110493422 LOC106564358 coding upstream 226949 13607347 ~ 13627739 (-)
LOC110485508 LOC106564355 coding upstream 247756 13628154 ~ 13644563 (-)
G1421879 NA non-coding downstream 113833 13263291 ~ 13264342 (-)
G1421877 NA non-coding downstream 115463 13261319 ~ 13262712 (-)
G1421830 NA non-coding downstream 156756 13221121 ~ 13221419 (-)
G1421861 NA non-coding downstream 200863 13176464 ~ 13177312 (-)
G1421945 NA non-coding upstream 55535 13435933 ~ 13436335 (-)
G1421977 NA non-coding upstream 92532 13472930 ~ 13496270 (-)
G1421978 NA non-coding upstream 98893 13479291 ~ 13482072 (-)
G1421987 NA non-coding upstream 119149 13499547 ~ 13499782 (-)
G1421744 NA other downstream 532018 12845797 ~ 12846157 (-)
G1422007 NA other upstream 200542 13580940 ~ 13581565 (-)
LOC118940035 NA other upstream 391741 13772139 ~ 13781710 (-)
G1422125 LOC106595916 other upstream 476478 13856876 ~ 13858250 (-)
LOC118940029 exosc1 other upstream 486022 13863439 ~ 13868827 (-)

Expression


Co-expression Network