Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940470 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 47828715 ~ 47833280 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| T-cell surface glycoprotein CD8 alpha precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036992.1 | True | 879 | mRNA | 0.44 | 3 | 47828715 | 47833280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136222 | LOC100136222 | coding | upstream | 10128 | 47814891 ~ 47818587 (+) |
| LOC100135862 | LOC106565314 | coding | upstream | 21197 | 47805358 ~ 47807518 (+) |
| LOC110493993 | LOC106565195 | coding | upstream | 38702 | 47744356 ~ 47790013 (+) |
| idh3b | LOC106565197 | coding | upstream | 85133 | 47728424 ~ 47743582 (+) |
| LOC110493989 | LOC106565315 | coding | upstream | 452015 | 47374636 ~ 47376700 (+) |
| LOC110493995 | LOC106565194 | coding | downstream | 105666 | 47938946 ~ 47971144 (+) |
| LOC110493996 | LOC106565313 | coding | downstream | 147701 | 47980981 ~ 47985604 (+) |
| LOC110493997 | LOC106565193 | coding | downstream | 167990 | 48001270 ~ 48026662 (+) |
| glrx | LOC106565191 | coding | downstream | 197612 | 48030892 ~ 48036585 (+) |
| ubap1 | LOC106565187 | coding | downstream | 270257 | 48103537 ~ 48147244 (+) |
| G1456920 | NA | non-coding | upstream | 100680 | 47727795 ~ 47728035 (+) |
| G1456883 | LOC106565198 | non-coding | upstream | 113968 | 47713943 ~ 47714747 (+) |
| G1456888 | NA | non-coding | upstream | 118949 | 47707696 ~ 47709766 (+) |
| G1456889 | NA | non-coding | upstream | 122790 | 47704632 ~ 47705925 (+) |
| G1456916 | NA | non-coding | upstream | 127141 | 47701339 ~ 47701574 (+) |
| G1457051 | NA | non-coding | downstream | 143654 | 47976934 ~ 47977139 (+) |
| G1457091 | NA | non-coding | downstream | 243086 | 48076366 ~ 48076682 (+) |
| G1457093 | NA | non-coding | downstream | 254325 | 48087605 ~ 48087822 (+) |
| G1457137 | NA | non-coding | downstream | 366761 | 48200041 ~ 48200356 (+) |
| G1457153 | NA | non-coding | downstream | 432684 | 48265964 ~ 48266185 (+) |
| G1456570 | NA | other | upstream | 599919 | 47228219 ~ 47228796 (+) |
| G1454824 | NA | other | upstream | 1970214 | 45856249 ~ 45858501 (+) |
| G1454127 | NA | other | upstream | 2492192 | 45335294 ~ 45336523 (+) |
| G1454049 | NA | other | upstream | 2569144 | 45258475 ~ 45259571 (+) |
| G1456969 | NA | other | downstream | 300 | 47833580 ~ 47839370 (+) |
| LOC110494013 | LOC106565177 | other | downstream | 555802 | 48389082 ~ 48424478 (+) |
| bsnb | LOC106565168 | other | downstream | 860041 | 48693321 ~ 48814670 (+) |
| erc2 | LOC106583361 | other | downstream | 1089527 | 48866589 ~ 49040356 (+) |
