G1458123


Basic Information

Item Value
gene id G1458123
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48830321 ~ 48830908 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1668178
atgttatgcacgtgagtgaggacccaaaagcggtttaacaaaaacagagtcctttaatgtcaaaacacaggtaagacatagatcctcttcaaatgtatatgatggcaaaataaacaacccgcagagagggcgacaaatgaaacataaagtccttctgaatatcacagaagagttccccttctagcagcagaggagaatagctgggttagagtccccttctagcagcagaggagattagctgggttgtagaggacagaggtacctgatcacacgtagcctcagatgaacaggcagattccgacaggacaggacaaggttgaagcaaacgagacgatagtttggttctggcatgagaaactcaaacgagaatctgacaaagacagaagcaggaacagagagagaaatagagacctaatcagagggaaaaaagggaacatgtgggaaaagggtgaacgaggtagttagagaagatgaggaacagctgggggaaggaggggaagagaaggtaacctaatacgaccagcagagggagacggagtgaagagaaagaacaggaacaagacataatatgacaatacatgacagtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1668178 True 588 lncRNA 0.45 1 48830321 48830908

Neighbor

gene id symbol gene type direction distance location
bsnb LOC106565168 coding upstream 17098 48693321 ~ 48814670 (+)
bap1 LOC106565169 coding upstream 140224 48677007 ~ 48690097 (+)
LOC110494023 LOC106565171 coding upstream 195768 48632152 ~ 48634553 (+)
LOC110494018 LOC106565175 coding upstream 246654 48579310 ~ 48583667 (+)
LOC110494016 LOC106565178 coding upstream 315029 48509877 ~ 48515292 (+)
erc2 LOC106583361 coding downstream 35681 48866589 ~ 49040356 (+)
LOC118940102 NA coding downstream 146728 48977636 ~ 48980567 (+)
LOC110494028 LOC106565296 coding downstream 179100 48977901 ~ 49120417 (+)
LOC118940474 NA coding downstream 203054 49033962 ~ 49035924 (+)
LOC110494034 LOC106565158 coding downstream 478244 49309152 ~ 49319617 (+)
G1458121 NA non-coding upstream 837 48829276 ~ 48829484 (+)
G1458115 NA non-coding upstream 8797 48821297 ~ 48821524 (+)
G1458093 NA non-coding upstream 54637 48775465 ~ 48775684 (+)
G1458033 NA non-coding upstream 57047 48773057 ~ 48773274 (+)
G1458124 NA non-coding downstream 1890 48832798 ~ 48833281 (+)
G1458139 NA non-coding downstream 16489 48847397 ~ 48847712 (+)
G1458140 NA non-coding downstream 17120 48848028 ~ 48848235 (+)
G1458176 NA non-coding downstream 114577 48945485 ~ 48950296 (+)
G1458133 NA non-coding downstream 142297 48973205 ~ 49003577 (+)
LOC110494013 LOC106565177 other upstream 405916 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 793738 48030892 ~ 48036585 (+)
G1456969 NA other upstream 990951 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 1022840 47805358 ~ 47807518 (+)
G1458807 NA other downstream 608098 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1350257 50181045 ~ 50192699 (+)
atxn7l2a LOC106565127 other downstream 1599899 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1945621 50776529 ~ 50777072 (+)

Expression


Co-expression Network