LOC118940102


Basic Information

Item Value
gene id LOC118940102
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48977636 ~ 48980567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948351.1
TTCAAACAACCCTCTCTGACACAGTCACCATCTTCTGTGAAGTCAGACTAACAGTCTGTAGATGTCTGATAAATGGTGTTGTTCATCCCTGATATGGCTGGTCATCTGTTTTTGGTCATCCTCCTTTTCGACACCTTCCAATACATCGAAGTCCAAGGTCATCACCTTCCTCCTCCCAGTCTGACAGTGAGGCCTGCAGTCatcaaagagagagagtcagttcAGCTGAGTTGTGAGACAACTCGCCATGTGTCTCACTGTTACTTCTAcatagaggagggggagaattTTCCAGACTCATCCTGTACTCAGacactcacaggaacagagctgcTCAAGAGGGCAGATCAAACGTTTCCAGATGTGGTCAAAGTGACGTGTTACTATGCTGTAGGGAAGTCTGACACATCTCCTTTAAGTGACCCTGTCTCAGTCACTGTTCAGGAAACAGAAACAGCTGTGCAATTATGGCAGGGAGCAGTGGGTGTGGCTTCTGGAGTGGCCATGTTCCTGATGGGATTGACAGCTGGCTATCTCTGCAGGAGGACCAGGAAAACCAATTCTCTGAGacatacagccagacaggatgatcacagaCAATGTGATTTGGTGATGGGAGCAGTGAGCAGTGCAGGCATGTTGGATTCAAGGGATGCTGGGATCTATTCTCTCATCACCACTGTACCGTCCATGTTCTTGCCCTCAGGCCCTGTTGAAGAAAATGGAGAGTCACCTGAAAACAACAATTCTGATACGTACCACGTATACAGCTCAATCCCCGACAGACCAGCAACCTCAGCCCAGCCGGATGGGTTGCACAGTCTTCTGCAGACACACTGACACTACACCTCTGGCTTTGTGTAGCTATGTCTCACACATCTCACACAAATACCCTCTTTTTCACATAATGTCCTTTATTATCACTCTTCAAGTTACTGTAAATAAGTCTCTTAGCAggtaatatatattttacatatggACACCTGGCTTATGTTACATGCCTGTCCATAATATCTGTTACTGTGTTAGCATTTTTATTTTGGAGTATTGGAGGAGTTTGGAGCATAATTAAATTTTTTCCTCCTAGTAAATGCTGTATTTATGTATATTCTGTGTGATTCCTCCTTCCATAACGGTTGGATAATATTTCTTAAATAAAATGTGTTCGGAGTCAAAATCGATAAATACAGACAATTTAAAATCACAATATCATCAGTTAATCTATTGCATTATGAGGccatatagtgtttgtttacatttacggTGT

Function

NR:

description
uncharacterized protein LOC109868942

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948351.1 True 1267 mRNA 0.43 9 48977636 48980567

Neighbor

gene id symbol gene type direction distance location
erc2 LOC106583361 coding upstream 39615 48866589 ~ 49040356 (+)
bsnb LOC106565168 coding upstream 164413 48693321 ~ 48814670 (+)
bap1 LOC106565169 coding upstream 287539 48677007 ~ 48690097 (+)
LOC110494023 LOC106565171 coding upstream 343083 48632152 ~ 48634553 (+)
LOC110494018 LOC106565175 coding upstream 393969 48579310 ~ 48583667 (+)
LOC110494028 LOC106565296 coding downstream 29441 48977901 ~ 49120417 (+)
LOC118940474 NA coding downstream 53395 49033962 ~ 49035924 (+)
LOC110494034 LOC106565158 coding downstream 328585 49309152 ~ 49319617 (+)
cacna1da LOC106583449 coding downstream 498349 49478916 ~ 49594500 (+)
LOC110494954 LOC106565153 coding downstream 624096 49604663 ~ 49657967 (+)
G1458176 NA non-coding upstream 27340 48945485 ~ 48950296 (+)
G1458140 NA non-coding upstream 129401 48848028 ~ 48848235 (+)
G1458139 NA non-coding upstream 129924 48847397 ~ 48847712 (+)
G1458124 NA non-coding upstream 144355 48832798 ~ 48833281 (+)
G1458123 NA non-coding upstream 146728 48830321 ~ 48830908 (+)
G1458226 NA non-coding downstream 38820 49019387 ~ 49020680 (+)
G1458237 NA non-coding downstream 87460 49068027 ~ 49083653 (+)
G1458264 NA non-coding downstream 161503 49142070 ~ 49142648 (+)
G1458265 NA non-coding downstream 165940 49146507 ~ 49168867 (+)
G1458293 NA non-coding downstream 201335 49181902 ~ 49183741 (+)
LOC110494013 LOC106565177 other upstream 553231 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 941053 48030892 ~ 48036585 (+)
G1456969 NA other upstream 1138266 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 1170155 47805358 ~ 47807518 (+)
G1458807 NA other downstream 458439 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1200598 50181045 ~ 50192699 (+)
atxn7l2a LOC106565127 other downstream 1450240 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1795962 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 1914373 50894903 ~ 50897444 (+)

Expression


Co-expression Network