G1459681


Basic Information

Item Value
gene id G1459681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50582195 ~ 50582491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669957
ggtctaccatatcaaaagctttggccaaatCCTGAATTCATGCTGAACTCTGACCTGCCTTGCCCAAGTGATATGTTATTTGTTATAAAATCCAAGGTCCAAGGGCTGCTACTCTGGTAATACTGATGCCCTTGCACTATAGCAACAAGGGAATTGAGGTATCctgcggggcggcaggtagcattGAGCCAAGGTTGCTgaaaagttgctggatcgaatccctgatctgacaaggtaaaaatctgtcgttctgcccctgaacaaggcagtcattgtaaataagaatttgttcttaac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669957 True 297 lncRNA 0.44 1 50582195 50582491

Neighbor

gene id symbol gene type direction distance location
LOC110494989 LOC106565121 coding upstream 39029 50510419 ~ 50543166 (+)
ldlrad2 LOC106565124 coding upstream 82109 50483057 ~ 50500086 (+)
LOC110494981 LOC106565126 coding upstream 136547 50438670 ~ 50445648 (+)
atxn7l2a LOC106565127 coding upstream 144583 50427145 ~ 50437612 (+)
sypl2a LOC106565128 coding upstream 159330 50408676 ~ 50422865 (+)
LOC110494982 LOC106565312 coding downstream 75550 50658041 ~ 50664680 (+)
LOC110494953 LOC106565294 coding downstream 82687 50665178 ~ 50697862 (+)
kctd20 LOC106565116 coding downstream 119671 50702162 ~ 50708829 (+)
LOC110494040 cept1 coding downstream 146550 50729041 ~ 50748688 (+)
trnaa-ugc-133 NA coding downstream 158117 50740608 ~ 50740681 (+)
G1459666 rl10a non-coding upstream 3526 50578017 ~ 50578669 (+)
G1459679 NA non-coding upstream 6051 50575856 ~ 50576144 (+)
G1459673 NA non-coding upstream 8336 50569250 ~ 50573859 (+)
G1459656 NA non-coding upstream 37375 50543854 ~ 50544820 (+)
G1459600 NA non-coding upstream 77683 50504266 ~ 50504512 (+)
G1459595 NA non-coding downstream 3145 50585636 ~ 50632370 (+)
G1459693 LOC106565117 non-coding downstream 62408 50644899 ~ 50650247 (+)
G1459724 NA non-coding downstream 126444 50708935 ~ 50711323 (+)
G1459756 NA non-coding downstream 178541 50761032 ~ 50761269 (+)
G1459764 NA non-coding downstream 188554 50771045 ~ 50771281 (+)
LOC110494957 qrich1 other upstream 398499 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1142866 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1541839 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1860951 48693321 ~ 48814670 (+)
G1459769 NA other downstream 194038 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 312449 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 497641 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3591523 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3673890 54256327 ~ 54264616 (+)

Expression


Co-expression Network