Gene
RNA
| Item | Value |
|---|---|
| gene id | G1464252 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 54395318 ~ 54396302 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1674939 | True | 985 | lncRNA | 0.38 | 1 | 54395318 | 54396302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494103 | LOC106565350 | coding | upstream | 11172 | 54363186 ~ 54384146 (+) |
| slc2a11a | gtr11 | coding | upstream | 33532 | 54350845 ~ 54361786 (+) |
| LOC110493214 | NA | coding | upstream | 76595 | 54317729 ~ 54318723 (+) |
| LOC110493213 | NA | coding | upstream | 78778 | 54302462 ~ 54316540 (+) |
| LOC110494098 | rab37 | coding | upstream | 119298 | 54265416 ~ 54276020 (+) |
| LOC118940476 | NA | coding | downstream | 30083 | 54426385 ~ 54434260 (+) |
| zgc:172271 | LOC106565354 | coding | downstream | 38059 | 54434361 ~ 54453753 (+) |
| sirt4 | sirt4 | coding | downstream | 57051 | 54453353 ~ 54461322 (+) |
| LOC110494110 | LOC106565356 | coding | downstream | 75657 | 54471705 ~ 54474472 (+) |
| frs3 | LOC106565358 | coding | downstream | 90758 | 54487060 ~ 54500326 (+) |
| G1464223 | NA | non-coding | upstream | 63293 | 54330258 ~ 54332025 (+) |
| G1464184 | NA | non-coding | upstream | 144040 | 54251040 ~ 54251278 (+) |
| G1464160 | NA | non-coding | upstream | 153013 | 54195807 ~ 54242305 (+) |
| G1464094 | NA | non-coding | upstream | 168468 | 54212866 ~ 54226850 (+) |
| G1464093 | NA | non-coding | upstream | 191861 | 54166231 ~ 54203457 (+) |
| G1464256 | NA | non-coding | downstream | 14938 | 54411240 ~ 54411465 (+) |
| G1464261 | LOC100196839 | non-coding | downstream | 21828 | 54418130 ~ 54418396 (+) |
| G1464264 | NA | non-coding | downstream | 22881 | 54419183 ~ 54419400 (+) |
| G1464263 | NA | non-coding | downstream | 24268 | 54420570 ~ 54420771 (+) |
| G1464262 | NA | non-coding | downstream | 25228 | 54421530 ~ 54421821 (+) |
| LOC110494100 | LOC106565348 | other | upstream | 130702 | 54256327 ~ 54264616 (+) |
| G1464092 | LOC106565344 | other | upstream | 205701 | 54147039 ~ 54189617 (+) |
| G1460249 | LOC106565103 | other | upstream | 3304429 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 3497874 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 3618246 | 50776529 ~ 50777072 (+) |
| G1466124 | NA | other | downstream | 1600346 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 1619275 | 56015577 ~ 56016613 (+) |
| LOC110494143 | LOC106565389 | other | downstream | 1691876 | 56088149 ~ 56127481 (+) |
| G1466224 | gem | other | downstream | 1822940 | 56219242 ~ 56220946 (+) |
