XLOC_033907


Basic Information

Item Value
gene id XLOC_033907
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 37808226 ~ 37808467 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068584
agagactttttgtctttatatcactccaataggactgtggacacactacaccaacacacagttcagtccaaaTAGCTAAAACatgatgatttttatcataggtgccttttaaaggTTTCtgattaattttgttttggagATCTGCTACAATATGTTTATATACATCGGATGTTACATAACACTATTGAACAAACACTTCCTCATGAAATATTTCACAACACCACCTCATTACTCAAAATGTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068584 True 242 lncRNA 0.33 1 37808226 37808467

Neighbor

gene id symbol gene type direction distance location
XLOC_033906 brd7 coding upstream 52880 37742299 ~ 37755346 (+)
XLOC_033905 NA coding upstream 222316 37579670 ~ 37585910 (+)
XLOC_033904 sall1a coding upstream 416054 37359004 ~ 37392172 (+)
XLOC_033903 NA coding upstream 617907 37186880 ~ 37190319 (+)
XLOC_033901 AL929307.1 coding upstream 622978 37060405 ~ 37185248 (+)
XLOC_033908 BX663605.1 coding downstream 42644 37851111 ~ 37863503 (+)
XLOC_033909 NA coding downstream 111011 37919478 ~ 37922901 (+)
XLOC_033910 cebpg coding downstream 281183 38089650 ~ 38095324 (+)
XLOC_033911 NA coding downstream 291942 38100409 ~ 38109640 (+)
XLOC_033912 NA coding downstream 335896 38144363 ~ 38145800 (+)
XLOC_033902 NA non-coding upstream 721414 37086597 ~ 37086812 (+)
XLOC_033899 NA non-coding upstream 1108397 36698642 ~ 36699829 (+)
XLOC_033913 NA non-coding downstream 342569 38151036 ~ 38168214 (+)

Expression


Co-expression Network