XLOC_033909


Basic Information

Item Value
gene id XLOC_033909
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 37919478 ~ 37922901 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068906
CGTGGAGCAAGCACGCTTCAGGTTTCATAGAGAAATCATAGAAATCATTGCACTCGACAAGAAGAGATCCTGGATGTCAAACGAGTTTTGGCTTTAGCGCATGTTTGACCTCTCCTAACCCTGTGCAGTGTGTCGAATGAGAGCTAGAGACCCTGGGTCTTCCTTTCCAAATCCCCTACTGCAAGTCAGCGTGTGGCAACCCTCCTCAACAACTGTCCTGAGAGGACCCATAATTCATCTCAAATCAGCATGTTTCAAAATCACATACAGCCAGCAGATCAGAGACGATTTCAACATTATGGATCTGAAACACTAagtaaaaaaaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068906 True 327 lncRNA 0.45 2 37919478 37922901

Neighbor

gene id symbol gene type direction distance location
XLOC_033908 BX663605.1 coding upstream 55975 37851111 ~ 37863503 (+)
XLOC_033907 NA coding upstream 111011 37808226 ~ 37808467 (+)
XLOC_033906 brd7 coding upstream 164132 37742299 ~ 37755346 (+)
XLOC_033905 NA coding upstream 333568 37579670 ~ 37585910 (+)
XLOC_033904 sall1a coding upstream 527306 37359004 ~ 37392172 (+)
XLOC_033910 cebpg coding downstream 166749 38089650 ~ 38095324 (+)
XLOC_033911 NA coding downstream 177508 38100409 ~ 38109640 (+)
XLOC_033912 NA coding downstream 221462 38144363 ~ 38145800 (+)
XLOC_033913 NA coding downstream 228135 38151036 ~ 38168214 (+)
XLOC_033914 BX323797.3 coding downstream 270442 38193343 ~ 38194702 (+)
XLOC_033903 NA non-coding upstream 729159 37186880 ~ 37190319 (+)
XLOC_033901 AL929307.1 non-coding upstream 734230 37060405 ~ 37185248 (+)
XLOC_033915 BX323797.4 non-coding downstream 279637 38202538 ~ 38203393 (+)

Expression


Co-expression Network