XLOC_033918 (si:dkey-78a14.4)


Basic Information

Item Value
gene id XLOC_033918
gene name si:dkey-78a14.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 38249858 ~ 38257848 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066346
AACATCCTGTGCCTTCACATCCTGTATATTTCTTCTGGAATTTGAAGTCAGAGTAGACTGTATGCATATTCTTCGCTGCTTAAGTAGACAAAATGAGTTCCCAAAAGTCTTGAAAATTACGTTTACTTCGTTATTTTGACTAAAACTTATACGAGTTTGATCATCGTGCTGTGGAAGTCTGGTATATTCTGGCAAACCGTTTCCCAACCCTGACCAGCCTGTCTGAAACCGTTTCCTTAAGAGGTTTATAATGGATCTGAGAGAGTACTTGAAAAGGATTGGGTTTACAGGACAGTTAAACAAACCTGACCTGGATAGTTTGTTCACCATCCACAAGCTGCATGTTATGAGTGTCCCATTTGAGAACCTCAGTGTTCACAATGGGGAGAAGAACTCAATGGACCTGCGTGTTATCTATAACAAAATAGTCGAGAGCAATCGAGGAGGCTGGTGTTGTGAAAACAACCTCTTGTTCTCATGGGCTCTGAAGGAGATGGGATACAAATCTACCATACTGAGCGGCAGAGTGTTTAACTCTCTGGAACAGGACTTCCTTCCTAATGACTCTCATCTCATCAATCTAGTGGAGATTGATGGAAAGCAGTACATCGCTGACGTGAGTTTTGGAGTGTCTTGTCAAATCTGGTATCCCTTAGAGTTGATCTCAGGTAAAGACCAGCCACAGCCTCCAGGAGTGTTTCGCCTCACAAACAACGGTGAGAAGTGGATTCTGGAGAAGACCGGAAGGAAGCAAATAATTGTAGATAACGGCTTTGCTGATTCTGGCCTTGTTGACAAACGGCTCATCAAAACAATATattgctttacattaacaccacGTGTTGTAGAGTATTTCCTCAAGATGTCGGTTATGTTGCAGACTAATCCCAGCTCTCTGTTCATGCTCAAGACCATTTGCTCCCTTCAGACGGCCACTGGATTTAGGGCTCTGATTGGTTGGACATACAGTGAAGTCACTTTCAAAGAGGACTCAGACTCAGTGGAAATGAAGAAAATCCCAGATGATGAGATTGAAGCTGTGCTGAAAGAAAAGTTTAACATGGTGTTGATTAATAAGTTCACACCTAAAAATAACAAAGCTTTTTACTCAATTTAGGAATCTGCTACTCTCTACTGGTGGATTGGTGGAATGCTAGTGCAGCCAGACTAAAACTAAAGACGGTTTCATCAtagcatttattcattgttatactctctgatgatttgaagtgcttcttttatccttaCTTGTAtatcactttggataaaagtgctaaatgagtaaatgtgaatgtaaaaaaagggagatctgctgtttaaaacatgtcAGTGACCTTGAGAATGATCGTCTAAATCAgtagtcaccaaacttgttcctggagggccggtgtcctgcagattttagctccaaccctaatcaaacacacctgaacaagctaatcaaggtcttactaggtatacttgaaacatccaggcaggtgtgttgaggtaagttggagctaaatcctgcagggacaccggccctccaggaccaggattggtgacccctggtctaaataaTTCTTGTGTGAGTGTTAATACTAGCCGAAAGTGATCTACAGAGACATTTCTGTCACTGAGGTCTTTGTAGCACTCAGTCTTACATCCTTGACAAACTGATGTCCTCATCTGAAGCTGTGTTGAGTTTGTCTTTAGGGCACAAAACTTCTGCCCTGGATACAGGCCAGATCCAAGATTATGTGTTCCCAGTTCTGTTATATACTTAGCCATGATTATTACAGCCTAATAATCCTTTGAAGATTTGGATTTTAACCCCTTAACTGTCTCCATCCTCGAAATCAAAAcctgaactttttttttgcaaactgtTTATAATATTACGCATATATTACCTATTTTCACCTGCAAATTCTGTATTTGGGGTGATAGTTAAGAGGTTAAAGTTTGCATTTGTCTTTTACTTGTATGCTAGTGCAGAAAGATTTGTCTTTTACCAAGATTTAGGGTGGGTTTTATTATACTATTTAACTTCATCATTATTCTGAAATTAAAAGGGGGAAGCTATAAGCTAGAGCAAGTAACATATTATAAAGTTActatgctatcatgacaatgtatgtaaacacttagttcttTTGCATCTATGCTCTGgtgtcaaaacagttgctgacatagacctgtgaTATCTCTGGTGACCGCAAGCCGGCAGAGAGCCAAGAATAACAGGACCacctagagcagtggtcaccaaacttgttcctggagggctggtgtcctgcagattttagctccaaccctaatcaaacacacctgaacaacctaatcaaggtcttacttggtatacttgaaacatccaggcaggtgtgttgaggcaagttgaagctaaaccctgcagggacaccagccctccaggaacaggattggtgacccctgacctagAGTAAAAACCTATCCAAAGATAGTCAAAAGTTAAAACGAGACACCTAGGCGTGTGTCAAATAATCTGTATAAAGATTGTGGAAAACACAGAGACTTTAGAAAGAGGATTGAAAGAGAAAGaggagaaggaaagaaagaatggAATTGTCCAGGAgtgacttcagaatgctctgaggtctgctctgctctttctctggTTTATTATGGTGAATAAAGTTTGATaaattttctgatattc
>TCONS_00066347
TATAATGGATCTGAGAGAGTACTTGAAAAGGATTGGGTTTACAGGACAGTTAAACAAACCTGACCTGGATAGTTTGTTCACCATCCACAAGCTGCATGTTATGAGTGTCCCATTTGAGAACCTCAGTGTTCACAATGGGGAGAAGAACTCAATGGACCTGCGTGTTATCTATAACAAAATAGTCGAGAGCAATCGAGGAGGCTGGTGTTGTGAAAACAACCTCTTGTTCTCATGGGCTCTGAAGGAGATGGGATACAAATCTACCATACTGAGCGGCAGAGTGTTTAACTCTCTGGAACAGGACTTCCTTCCTAATGACTCTCATCTCATCAATCTAGTGGAGATTGATGGAAAGCAGTACATCGCTGACGTGAGTTTTGGAGTGTCTTGTCAAATCTGGTATCCCTTAGAGTTGATCTCAGGTAAAGACCAGCCACAGCCTCCAGGAGTGTTTCGCCTCACAAACAACGGTGAGAAGTGGATTCTGGAGAAGACCGGAAGGAAGCAAATAATTGTAGATAACGGCTTTGCTGATTCTGGCCTTGTTGACAAACGGCTCATCAAAACAATATattgctttacattaacaccacGTGTTGTAGAGTATTTCCTCAAGATGTCGGTTATGTTGCAGACTAATCCCAGCTCTCTGTTCATGCTCAAGACCATTTGCTCCCTTCAGACGGCCACTGGATTTAGGGCTCTGATTGGTTGGACATACAGTGAAGTCACTTTCAAAGAGGACTCAGACTCAGTGGAAATGAAGAAAATCCCAGATGATGAGATTGAAGCTGTGCTGAAAGAAAAGTTTAACATGGTGTTGATTAATAAGTTCACACCTAAAAATAACAAAGCTTTTTACTCAATTTAG

Function

symbol description
si:dkey-78a14.4 Predicted to enable arylamine N-acetyltransferase activity. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); carcinoma (multiple); contact dermatitis (multiple); leukemia (multiple); and lung disease (multiple). Orthologous to several human genes including NAT1 (N-acetyltransferase 1).

GO:

id name namespace
GO:0016407 acetyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0004060 arylamine N-acetyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110408-8 Predicted to enable arylamine N-acetyltransferase activity. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); carcinoma (multiple); contact dermatitis (multiple); leukemia (multiple); and lung disease (multiple). Orthologous to several human genes including NAT1 (N-acetyltransferase 1).

Ensembl:

ensembl_id ENSDARG00000036066

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066346 False 2677 mRNA 0.41 2 38249858 38257848
TCONS_00066347 True 871 mRNA 0.42 1 38255418 38256288

Neighbor

gene id symbol gene type direction distance location
XLOC_033917 BX323797.2 coding upstream 2111 38245927 ~ 38247747 (+)
XLOC_033916 BX323797.1 coding upstream 13618 38229070 ~ 38236240 (+)
XLOC_033915 BX323797.4 coding upstream 46465 38202538 ~ 38203393 (+)
XLOC_033914 BX323797.3 coding upstream 55156 38193343 ~ 38194702 (+)
XLOC_033913 NA coding upstream 81644 38151036 ~ 38168214 (+)
XLOC_033919 cnep1r1 coding downstream 901 38258749 ~ 38264380 (+)
XLOC_033920 gpatch1 coding downstream 7515 38265363 ~ 38277255 (+)
XLOC_033921 lrp3 coding downstream 21012 38278860 ~ 38310177 (+)
XLOC_033922 NA coding downstream 57807 38315655 ~ 38346479 (+)
XLOC_033923 rhpn2 coding downstream 91817 38349665 ~ 38393421 (+)
XLOC_033929 BX957297.3 non-coding downstream 391288 38649136 ~ 38649529 (+)
XLOC_033931 BX957297.4 non-coding downstream 420570 38678418 ~ 38678532 (+)
XLOC_033951 BX908792.2 non-coding downstream 1455367 39713215 ~ 39713774 (+)
XLOC_033960 dre-mir-153a non-coding downstream 2227662 40485510 ~ 40485590 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_10453245_10454111 NA coding CI01000026 null 10453125 ~ 10454176 (+)