XLOC_034560 (CT030046.1)


Basic Information

Item Value
gene id XLOC_034560
gene name CT030046.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 13452269 ~ 13452389 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067306
ACCACTGTTTCTCACATTCTcattgcaactctcacatggtcgcccactgaagctaagcagggctgtgcctggtcagtacctggatgggagaccacatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080109

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067306 True 121 rRNA 0.54 1 13452269 13452389

Neighbor

gene id symbol gene type direction distance location
XLOC_034559 si:ch73-119p20.1 coding downstream 71140 13375565 ~ 13381129 (-)
XLOC_034558 polr2l coding downstream 80785 13363898 ~ 13371484 (-)
XLOC_034557 sdhaf2 coding downstream 89679 13353080 ~ 13362590 (-)
XLOC_034556 NA coding downstream 115929 13331403 ~ 13336340 (-)
XLOC_034555 rplp2l coding downstream 483568 12959846 ~ 12968701 (-)
XLOC_034561 NA coding upstream 112272 13564661 ~ 13573636 (-)
XLOC_034562 spg21 coding upstream 173540 13625929 ~ 13648663 (-)
XLOC_034563 kbtbd13 coding upstream 296298 13748687 ~ 13750108 (-)
XLOC_034564 rlbp1a coding upstream 415333 13867722 ~ 13884610 (-)
XLOC_034565 NA coding upstream 434645 13887034 ~ 13887619 (-)
XLOC_034552 CR926461.1 non-coding downstream 732358 12719781 ~ 12719911 (-)
XLOC_034548 NA non-coding downstream 1393168 12028925 ~ 12059101 (-)
XLOC_034546 LO018324.1 non-coding downstream 1787281 11656567 ~ 11664988 (-)
XLOC_034544 CABZ01068273.2 non-coding downstream 1848375 11603780 ~ 11603894 (-)
XLOC_034567 CR627485.1 non-coding upstream 642405 14094794 ~ 14094911 (-)
XLOC_034568 NA non-coding upstream 859784 14312173 ~ 14352632 (-)
XLOC_034569 NA non-coding upstream 901125 14353514 ~ 14381994 (-)

Expression


Co-expression Network