XLOC_034568


Basic Information

Item Value
gene id XLOC_034568
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 14312173 ~ 14352632 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069148
AGGAGAAACACGAGGTCTGACGaaacacaaatcttttttttcttggaAAACACACATACGTGACACGACcattatataaacatttactaTTAGCAATAAACAACCTGTGTGTATTAGATTTCCAGCTATCTAAATCTAACAAACACAGCGCTCATATATGGATGAGCCTGTGGAGAAAGAAGAGACTCATTAGTCGTTCGGATATCAAGTTAATATTGTGGGAGAGACTCTGGACTGCTGTAACACGGGGGCCGGAGCATGATGATCACGCCaccctcaacccgaaagtgaaaacgGAAGTGACCGGTTCAGGAAGTGAAGGGGTTGGCAGTGTCTTCTGGGTCGTCTCAATGGATGTGTCAGCCCTGCTTGCAGTCCATCATTGTTATTTTGGTTGTCAG
>TCONS_00069149
CTCCGTCCCagtaatttatgtaatttattacgGCGTGATTGACTTGCATCCGTAAAATCAACAATAAGAGGAGAAACACGAGGTCTGACGaaacacaaatcttttttttcttggaAAACACACATACGTGACACGACcattatataaacatttactaTTAGCAATAAACAACCTGTGTGTATTAGATTTCCAGCTATCTAAATCTAACAAACACAGCGCTCATATATGGATGAGCCTGTGGAGAAAGAAGAGACTCATTAGTCGTTCGGATATCAAGTTAATATTGTGGGAGAGACTCTGGACTGCTGTAACACGGGATCCGACGGGGCctctgaaaaaaacacacaaggaCCGCTGGCAGCAGCGCATACAGATGACGCTCGGCCTCTGCCCTAGACCAGGGGGTGGGAAGGAGGATACAAGGGGGCCGGAGCATGATGATCACGCCaccctcaacccgaaagtgaaaacgGAAGTGACCGGTTCAGGAAGTGAAGGGGTTGGCAGTGTCTTCTGGGTCGTCTCAATGGATGTGTCAGCCCTGCTTGCAGTCCATCATTGTTATTTTGGTTGTCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069148 False 401 lncRNA 0.44 2 14312173 14352564
TCONS_00069149 True 577 lncRNA 0.46 3 14312173 14352632

Neighbor

gene id symbol gene type direction distance location
XLOC_034567 CR627485.1 coding downstream 217262 14094794 ~ 14094911 (-)
XLOC_034566 slc39a1 coding downstream 405764 13896769 ~ 13906409 (-)
XLOC_034565 NA coding downstream 424554 13887034 ~ 13887619 (-)
XLOC_034564 rlbp1a coding downstream 427563 13867722 ~ 13884610 (-)
XLOC_034563 kbtbd13 coding downstream 562065 13748687 ~ 13750108 (-)
XLOC_034569 NA coding upstream 882 14353514 ~ 14381994 (-)
XLOC_034570 kif7 coding upstream 40427 14393059 ~ 14446512 (-)
XLOC_034571 dre-mir-7a-2 coding upstream 97892 14450524 ~ 14450620 (-)
XLOC_034572 mrps11 coding upstream 159368 14512000 ~ 14535862 (-)
XLOC_034573 NA coding upstream 238435 14591067 ~ 14632839 (-)
XLOC_034561 NA non-coding downstream 738537 13564661 ~ 13573636 (-)
XLOC_034560 CT030046.1 non-coding downstream 859784 13452269 ~ 13452389 (-)
XLOC_034556 NA non-coding downstream 975833 13331403 ~ 13336340 (-)
XLOC_034574 NA non-coding upstream 643213 14995845 ~ 15084417 (-)
XLOC_034578 NA non-coding upstream 1250421 15603053 ~ 15610261 (-)

Expression


Co-expression Network