XLOC_034587 (btr05)


Basic Information

Item Value
gene id XLOC_034587
gene name btr05
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 16196903 ~ 16205471 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067342
AACAGAAATGGCAAATTCTTTACCACCACCATTACCAATGCGAACCACCAAGAGACTAAGCATGGACAGATCTCTCTCTCTGTCATCCTCCATGCGTCCTCTGTTCGAAGAGCTTCAGTGTTCAGTTTGTCTGGATGTGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGTAAGAGCTGCCTGAACTCGAGCTGGGAGAACAGTCAGGTCTGTAGCTGTCCATTGTGTAGAGAAAGATTCAGCGATAGACCTGACTTGAAGATCAACACAGAGCTTAGACAGCTTGGCCAACTCTTTAAGGAAAGGTTGACTGTGCGAATATCTGAGGTTCTCTGTGACATCTGTGATGGGAGAAAGATGAAAGCTTTGAAGTCCTGTTTGACATGTCAGACTTCTTACTGTGAAACTCACTTAGAGCCTCATCGAAGAGTCCCGAACTTCAAGAAACACAAACTAATAGAGCCTGTGAAGAATATAAAGGACTACATATGCCAGAAACACGAGAGACCTCTGGAGCTGTTCTGTAGAGATGatcagatgtgtgtttgtgtgttttgcacTGATGGAGACCACAAGACTCACAACACTGTTCCTCTAGAGGAGGAGAGTAAAGTGAAAAAGACTCAGCTGATAGAAACTCAGAAAGACATGCAGAAGATGATTCAGGACAGAAACAAGAAGATTCGAGACATCAAACACTTGGCAGAACTCAGAAAAAAGCAGGATGAAAAGCTGATTCAAGAGCTGCAGCAGGAAATCAATGAACTGAAGATAAGAAACTCAGAGCTGGATCATCTCTCACACACTAAGGATCACCTTCAGCTCCTACAGCTTTACCCATCCATATGCAGCCCTTTAAATGGCAGGAACTGGTCTGATGTGAGCTTGGAGACTCTGAGGAGAGCTCTGACTCAACTGCAGGAAACCCCAGACCAGAAAGTCAGTCAAACTGTGTTGAGGAGGATACAGCAGTTTGCAGTGGATGTGACTCTGGATCGTGATACCGCTTATCCAGAACTCATCCTGTCTGATGATGGAAAAGAAATGATACAAGGAGACGTTTATCAAGACCTCCCAGATATCCCAGAGAGGTTTGATCATTGCCCTTCGGTCCTAGGAAGAGAGGGATTCTCCACAGGGAGATTTTATTTTGAGGTGAAGGTGAAGGGCAAGACTGAGTGGATTTTAGGTGTGGTCAGAGAATCAATTAACAGGAAGGGGAAAATCAAACTGAGTCCTCAAGACGGACACTGGTGTGTGGCTCTGATGAAAGGAGATCAATACTGGGCCTGTGCTGATCCAGCGGTCTCTCTAAATGTGAAGCCGCAGAAGGTTGGGGTGTTTGTGGATTATGAGGACGGTCTGGTCTGCTTCTTCGATGTGGTGTCCAGATCTCATATCTTCTCTTTCACTAGACAGTCTTTTATTAATAGGGTTTATCCGTATTTTTGTGCGTGTTTTACCAGTAACGGTAAACATTCAGTACCACTGATCATCTCACCTGTTAAATACAGCGAATGAAAGTACACCTCAGATAAAATTGACGAGTTTTAATGAGTTTGTAAACAAGGAATCTCAAAATGGtaattatgcatatttttaaatcaaggttCATGTTGTGATCATGTTAGCTCCTGCTGGTACATCCTGCAACTACACCATTTGCTGCAAAATCAGTGAAATGTACTCATTAATTTATCTAAaaatttgtaaagaaaaaaattattttattgtaataaagacCATTATATATGGGATATTtcgtcattattatttttttatttgttgcatgAAATActaactcactggccactttattaggttcatctgtctaactgctcgttatgCTAATTTCTTAcgagccaatcacatggcagcaactcaatgaatttaggcatgtagacatggtcaagaagatctgctgcagtttaaactgaccATCAATTTTTGGAAGAAAGGTgttttaggtgactttgaatgtggcagacaggctggtctgagtatttcagaaactgctgatttactgggatttttatgcacaaccatctctagggcttgcagagaatggtttgaaaaagataaaatatccagtgagcggcagttctgtgattgcaaatgccttgttgatgccattggtcagaggagaatggtctgactggtttgagctgatataaaggcaacagaaactcagataaccactcgttacaaccgaggtatgcagaagagcttctctgaacgcacaacacgtccaaccttgaggcagactCCTGTCACtcctgccactcctgtcagctaagaacaggaaactgaggctacaatttgcacaggctcaccaaaattagacaatagaagattggaaaaatgttgtctggtcagatgagtctcaatttctgctgcgacaatcAGAtgttagagtcagaatttggcattaacaacatgaaagcatgcatccatccTGGTTTGTATCATCGactcaggctgctgctggtggtgtaatggtgtggatattttcttggcacactttgggccaattagtaccacttagactggtttcttaaacatgacaatgagttcactgtactcaaatggcctccacacagtcaccagatctcaatccaatagagtcccttagggatgtggtggaacgggagatttggatcaagaatgtgcagctgacaaatctgcagcaactgtgtgatgctatcatgtcagtatagaccaaaatctctgaggaatatttacagtaccttgttgaatctaaggGGGTCCatccaggtactagtaaggtgtacctaataaagtggccggtgagtgtgtgaatgttcaCATGATCTAAATATGAAGTGATAATTTTGTACCATGATGATATGACTGATATGATTGTCATTTAATGAACTCAGGACTGATGTATGTCTACCATATCTTTTTCACTTACTTTTTTTCACACAAGAAACAACAACTCTAGCAGTTTAGCACAAAATTTTCAGAGCATAAACAAGTTACTTTGTAtaactagcacttcttgtgtgtattgcctcttcttgttgaattgctgaatgcctccgctgttgtaagtcactttggacaaaagcgtctgctttATGTAAAATGCAAATGTTTTCTATAAAAAGCAAACCAGAATTTGGGGGTCTGTGGCATTATTAGCATAATGACACAGGGCACGACTTATAGTTAAAATGGCTTATTTCTCTGGAACATTCTTTCCATACGTTCGGGATAATGTAAGTGCA
>TCONS_00067343
CTGACATGTCTGAAGGTGGAACTACCGAACAACAGTCTTAAATAAAGATATAACTTGAAATAATCGAAAAAATATTAAGACTTCTTGTGAACACAGCTGATATTCACTCACAGAACAGAAATGGCAAATTCTTTACCACCACCATTACCAATGCGAACCACCAAGAGACTAAGCATGGACAGATCTCTCTCTCTGTCATCCTCCATGCGTCCTCTGTTCGAAGAGCTTCAGTGTTCAGTTTGTCTGGATGTGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGTAAGAGCTGCCTGAACTCGAGCTGGGAGAACAGTCAGGTCTGTAGCTGTCCATTGTGTAGAGAAAGATTCAGCGATAGACCTGACTTGAAGATCAACACAGAGCTTAGACAGCTTGGCCAACTCTTTAAGGAAAGGTTGACTGTGCGAATATCTGAGGTTCTCTGTGACATCTGTGATGGGAGAAAGATGAAAGCTTTGAAGTCCTGTTTGACATGTCAGACTTCTTACTGTGAAACTCACTTAGAGCCTCATCGAAGAGTCCCGAACTTCAAGAAACACAAACTAATAGAGCCTGTGAAGAATATAAAGGACTACATATGCCAGAAACACGAGAGACCTCTGGAGCTGTTCTGTAGAGATGatcagatgtgtgtttgtgtgttttgcacTGATGGAGACCACAAGACTCACAACACTGTTCCTCTAGAGGAGGAGAGTAAAGTGAAAAAGACTCAGCTGATAGAAACTCAGAAAGACATGCAGAAGATGATTCAGGACAGAAACAAGAAGATTCGAGACATCAAACACTTGGCAGAACTCAGAAAAGATGAAAAGCTGATTCAAGAGCTGCAGCAGGAAATCAATGAACTGAAGATAAGAAACTCAGAGCTGGATCATCTCTCACACACTAAGGATCACCTTCAGCTCCTACAGCTTTACCCATCCATATGCAGCCCTTTAAATGGCAGGAACTGGTCTGATGTGAGCTTGGAGACTCTGAGGAGAGCTCTGACTCAACTGCAGGAAACCCCAGACCAGAAAGTCAGTCAAACTGTGTTGAGGAGGATACAGCAGTTTGCAGTGGATGTGACTCTGGATCGTGATACCGCTTATCCAGAACTCATCCTGTCTGATGATGGAAAAGAAATGATACAAGGAGACGTTTATCAAGACCTCCCAGATATCCCAGAGAGGTTTGATCATTGCCCTTCGGTCCTAGGAAGAGAGGGATTCTCCACAGGGAGATTTTATTTTGAGGTGAAGGTGAAGGGCAAGACTGAGTGGATTTTAGGTGTGGTCAGAGAATCAATTAACAGGAAGGGGAAAATCAAACTGAGTCCTCAAGACGGACACTGGTGTGTGGCTCTGATGAAAGGAGATCAATACTGGGCCTGTGCTGATCCAGCGGTCTCTCTAAATGTGAAGCCGCAGAAGGTTGGGGTGTTTGTGGATTATGAGGACGGTCTGGTCTGCTTCTTCGATGTGGTGTCCAGATCTCATATCTTCTCTTTCACTAGACAGTCTTTTATTAATAGGGTTTATCCGTATTTTTGTGCGTGTTTTACCAGTAACGGTAAACATTCAGTACCACTGATCATCTCACCTGTTAAATACAGCGAATGAAAGTACACCTCAGATAAAATTGACGAGTTTTAATGAGTTTGTAAACAAGGAATCTCAAAATGGtaattatgcatatttttaaatcaaggttCATGTTGTGATCATGTTAGCTCCTGCTGGTACATCCTGCAACTACACCATTTGCTGCAAAATCAGTGAAATGTACTCATTAATTTATCTAAaaatttgtaaagaaaaaaattattttattgtaataaagacCATTATATATGGGA

Function

symbol description
btr05 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080219-8 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000074813

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067342 False 3261 mRNA 0.41 7 16196903 16204885
TCONS_00067343 True 1874 mRNA 0.42 8 16198397 16205471

Neighbor

gene id symbol gene type direction distance location
XLOC_034586 btr04 coding downstream 1759 16185376 ~ 16195144 (-)
XLOC_034585 CT030144.2 coding downstream 15311 16176847 ~ 16181592 (-)
XLOC_034584 NA coding downstream 22574 16172570 ~ 16174329 (-)
XLOC_034582 BX957347.2 coding downstream 47636 16075216 ~ 16149267 (-)
XLOC_034583 BX957347.1 coding downstream 82475 16114300 ~ 16114428 (-)
XLOC_034588 btr06 coding upstream 138 16205609 ~ 16214891 (-)
XLOC_034589 NA coding upstream 16574 16222045 ~ 16223104 (-)
XLOC_034590 btr07 coding upstream 25892 16231363 ~ 16237861 (-)
XLOC_034591 NA coding upstream 142029 16347500 ~ 16349432 (-)
XLOC_034592 csrp3 coding upstream 342748 16548219 ~ 16562202 (-)
XLOC_034580 NA non-coding downstream 296450 15896968 ~ 15900453 (-)
XLOC_034594 BX088559.1 non-coding upstream 636528 16841999 ~ 16842116 (-)
XLOC_034596 NA non-coding upstream 1017066 17222537 ~ 17258812 (-)
XLOC_034597 CU179757.1 non-coding upstream 1056145 17261616 ~ 17264309 (-)

Expression


Co-expression Network