XLOC_034718 (C7H4orf48)


Basic Information

Item Value
gene id XLOC_034718
gene name C7H4orf48
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 24485048 ~ 24491897 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067567
CTCAATCCTACGGCGCACCGCGAAGGACAATAATCATAAAAACGCGATTGACGCTCCGCAACGAAACTGCGTCCTGTGAAGGAGGGCGGTGGTTTGACTAACGGTGCCAGTGTCTTCATCAGAAAACTACAGgtttattgtgtgtgtgcggCGACAGTATGAGGCCAAGCGGAGCTCTGGCGGCGGCGGCGGTGATGCTGATGCTGCTCGTGTGTTGCCAAGCCGAGGACTCAGGCTCGGTCATCCCGGCCGAGAGCCGGCCATGTGTTGACTGTCATGCCTTCGAGTTCATGCAGAGAGCCTTGCAAGACCTGAAGAAAACAGCCTTCAACTTAGACTCACGGACGGAGAATTTGGTGCTGAGGGCCGAGAAGAGGGCGTTGTGTGACTGCATGCCTGCCAGCAGCCTGCGCTAAAAAGCCAGCGTAAACACTGTCCTCAGATACAGAAACCTTTATGTACCTAAAGGATACTACCTGCTCTTAGTCAAACACACTCCGTTGCTCTCAAACACGCTTCCTGTCATGTGTGACAAGAAACATGTTTTATCTTTCATCATAATATGTGCATAAACACACATTCCTGACAGAAGTCAACACACAACATTCCACTGTTGAAACGTCGATGCTGAGAGGCACATTCATGATAGGGCAGCAGCAAATACATTGTATCTTCCATATAAGTGAATATAAACACAGGGGAATATAAACACCTCTCCAGGCACAATGCACTGCAAAAGATTCTgcaaacacattatttattatcattatttgcaCAGTAGACtagatgtttttcttttttaaatactaacggctttttatatttttgttcttaGGATATATGATTATTAGTCACAATGGTTAAGCAGATATTTAGATCTATTAAATATATCAATGGCGTTGTTTGCTGTAAGATTGGTAGATCTACGACTAGAAGAGAGTCTGCATGTAAAGTGATAGTTTAGAGTTTTATATGAGGATTTATGAGAAGGGAAATGAAGGAATGGTTCATAGAGATTACTTTGGTACTAAGATGTGAGTTCACAGCTGTAACAATGTCTTTTTGTGTGTAGAAAAGTGCATTAAAAACATATGTGACGTCACGTTCCTGTTGTAGGCTATTTGTTTCATAGATGCTCTTTTGAGCAGTTATCCTTTGGGTTAGTTGACCTGTTTTGgtttttggaattatttttacgtttattttaattaatcttgtGACCTTTCTATGTTTTTGATGTTCATCTAAACTGTACAGTTTAAGCCATGTgcgttatattatatattacatacacCATATTACATGTAATACATAAtacagcgttatggatgtgacatttgcagtaaaactcaaaacataaacgCGCATGCAAAgtaaatgttaaaattatattgaaacatttgtttatattttcgagaacaactgaccacaaagttaagggaccagaaaaatatcaatctgtaaacatgttatttaatttaaatgagggaaataaacatgcgttttggatgtgacaaaaacagtctgcaagtttacagaatacaacatactttgtagaaattctgtgaattaaattgcacaacctaaaaaaatgctaatcaaaaggataagagtcagctctctatagaacaaccatgattgattttattttaattaatatgttcACATATTATgaggaaaaaaaagtgttgttatggatgtgacatctctccgttatggatgtgacagatgtgataTTGCCACTTGTgcgactttggtaaatcaaatagaatagtttgaaaacattgacagatgcattttggTGAAAatacatttgcatggaattgctcatatatatatatgtatgtatgtatgtatgtaagtatgtatgttacagccttattccaaaatgggttacattaatttatttcttcaaacttctacacacaatgccccataatgacatgtgaaaaaatattttgtgaaattgttgcacatttataaaaaaaaaaaaaaccctgaaaaatcaaatgtacatcaagcgtatatttcagatttttcaggttttttatttttaacaaatttgcaacaaaatcttttttacattgtcattatggggtattgcgaGTAGAATGCTGAGGAAGTAATTTAAACTAAAACTATTAAATGGAAATTTTTGTTGCTTGACATATTGACATACACAGATATGATAATAAGCTTATCAATAAAAGTATCCTGCATattaattagtaaaatattatatactgttatCAAGGCAAAGATTAGAAGTTAGTTAATAAAACTTATATGTTTA
>TCONS_00067568
AGACTgtcattttcaaagcatttctcAGTTGTTATTCGCTTTTCTTAAAACGTCGTCTGAATGACTACATGTAATTATTagctcatttgtgtgtgtgtgtgtgttttctcgcTGTGGCAggtttattgtgtgtgtgcggCGACAGTATGAGGCCAAGCGGAGCTCTGGCGGCGGCGGCGGTGATGCTGATGCTGCTCGTGTGTTGCCAAGCCGAGGACTCAGGCTCGGTCATCCCGGCCGAGAGCCGGCCATGTGTTGACTGTCATGCCTTCGAGTTCATGCAGAGAGCCTTGCAAGACCTGAAGAAAACAGCCTTCAACTTAGACTCACGGACGGAGAATTTGGTGCTGAGGGCCGAGAAGAGGGCGTTGTGTGACTGCATGCCTGCCAGCAGCCTGCGCTAAAAAGCCAGCGTAAACACTGTCCTCAGATACAGAAACCTTTATGTACCTAAAGGATACTACCTGCTCTTAGTCAAACACACTCCGTTGCTCTCAAACACGCTTCCTGTCATGTGTGACAAGAAACATGTTTTATCTTTCATCATAATATGTGCATAAACACACATTCCTGACAGAAGTCAACACACAACATTCCACTGTTGAAACGTCGATGCTGAGAGGCACATTCATGATAGGGCAGCAGCAAATACATTGTATCTTCCATATAAGTGAATATAAACACAGGGGAATATAAACACCTCTCCAGGCACAATGCACTGCAAAAGATTCTgcaaacacattatttattatcattatttgcaCAGTAGACtagatgtttttcttttttaaatactaacggctttttatatttttgttcttaGGATATATGATTATTAGTCACAATGGTTAAGCAGATATTTAGATCTATTAAATATATCAATGGCGTTGTTTGCTGTAAGATTGGTAGATCTACGACT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000089877

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067567 False 2293 mRNA 0.35 4 24485048 24491897
TCONS_00067568 True 919 mRNA 0.43 3 24486410 24491614

Neighbor

gene id symbol gene type direction distance location
XLOC_034717 nat8l coding downstream 12057 24457191 ~ 24472991 (-)
XLOC_034716 ptgr1 coding downstream 94169 24375070 ~ 24390879 (-)
XLOC_034715 si:dkey-11k2.7 coding downstream 111386 24366962 ~ 24373662 (-)
XLOC_034714 txn coding downstream 120222 24357231 ~ 24364826 (-)
XLOC_034713 slc7a8a coding downstream 248684 24208611 ~ 24236364 (-)
XLOC_034719 faah2b coding upstream 16226 24508123 ~ 24520866 (-)
XLOC_034720 NA coding upstream 89070 24580967 ~ 24589865 (-)
XLOC_034721 pik3c3 coding upstream 101312 24593209 ~ 24621696 (-)
XLOC_034722 rgp1 coding upstream 135179 24627076 ~ 24645540 (-)
XLOC_034723 calb2b coding upstream 189381 24681278 ~ 24699985 (-)
XLOC_034707 CR388231.6 non-coding downstream 415152 24058768 ~ 24069896 (-)
XLOC_034702 NA non-coding downstream 535363 23946001 ~ 23949685 (-)
XLOC_034701 CR388231.5 non-coding downstream 578555 23902484 ~ 23906493 (-)
XLOC_034698 NA non-coding downstream 626721 23852487 ~ 23858327 (-)
XLOC_034695 NA non-coding downstream 910871 23569727 ~ 23574177 (-)
XLOC_034727 BX511061.1 non-coding upstream 348804 24840701 ~ 24853898 (-)
XLOC_034734 CU464085.1 non-coding upstream 799136 25291033 ~ 25291152 (-)
XLOC_034735 CU929416.1 non-coding upstream 847859 25339756 ~ 25523467 (-)
XLOC_034737 CU467013.2 non-coding upstream 1271287 25763184 ~ 25763298 (-)

Expression


Co-expression Network