XLOC_034929


Basic Information

Item Value
gene id XLOC_034929
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 38140666 ~ 38142046 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069273
TGAGGTGATAACCTTCACTGTGTCGCAACAAAGTTCATATTGCGTCCTAAATCCCTACAGAAGTTTCAAAACCGATGAATGAGCTGTCAGAGGGCGGCGTGCGGGGGATCGTAACAACTGCATGAGGCAAAGGATGAAACTCAAGCTAGTAGATCACTGTGACAGAAGAACATGACACAGCTGCTGAACATCAGAAACTGCACTGAAGGACAACTCCTGAATAATCATCATTGATTCCCTTGAGCAATTCACACAGGTTGCTTAAGTTAGGATTGTTCCTGCTATAAATGTAATATACAGCAAATGTCTTCTAAATGACTACATGGTATTTAACAGCAACAAAATCAGTTTTCCAGAATGTGAATCAAAAAGCCAGTATAACACTTACTGAGGTGAAAAACAAAGTCACACACGCtcgctcacatgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttgtatatacAGTTTGGTGTACAGGCACTCTCTTTagacataatgtttttttttttcattttaaaatacttattatttGTGTCTGTTTCACCTCTACTCACAAAGCCAGCACTCACAGGCAGAGgcaaaggtaacactttattttgatggtccatttgagtattagtagactgtctacttaatatctgttgatactgctgctaaacagacatttaactgactataagaaacttttcaaaTGCATGCCAACATAAACTAACCCCAACCctatctaacagtctacttataatctaatgagaattagttggcatgtagaagcaatgtaacttaaattcaacaaacggaccatcaaaattaagtgtgacCATGACAAACTTTAAAAATCAAAAGACcttgttaaatataatatttaagcaTTTCAAATTACAGAGGCACAATGAATGCCCTCTAAATCACCCTAAAAGTGTATAACTAGGTAATTTTGTCCATGTAACCAAATAAACCACAATGcaactcatttatttattaattttcttttttggcttagtcccatttatcaggggtcaccacagtgaaatgaaccgccaacttatacagcatatgttttacacagcggatgctcttccagctgcaacccaacactggaaaacacccataaactctca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069273 True 1172 lncRNA 0.38 3 38140666 38142046

Neighbor

gene id symbol gene type direction distance location
XLOC_034928 cebpa coding downstream 52801 38084986 ~ 38087865 (-)
XLOC_034927 BX323060.3 coding downstream 101620 38036841 ~ 38039046 (-)
XLOC_034926 heatr3 coding downstream 221191 37898618 ~ 37919475 (-)
XLOC_034925 tent4b coding downstream 244895 37861247 ~ 37895771 (-)
XLOC_034924 adcy7 coding downstream 282000 37761524 ~ 37858666 (-)
XLOC_034930 abcc12 coding upstream 16558 38158604 ~ 38183331 (-)
XLOC_034931 NA coding upstream 60499 38202545 ~ 38257860 (-)
XLOC_034932 NA coding upstream 95185 38237231 ~ 38249132 (-)
XLOC_034933 slc7a10a coding upstream 173601 38315647 ~ 38340674 (-)
XLOC_034934 BX323855.2 coding upstream 215869 38357915 ~ 38395068 (-)
XLOC_034923 BX664719.1 non-coding downstream 446714 37693838 ~ 37693952 (-)
XLOC_034919 CT030153.1 non-coding downstream 663171 37420980 ~ 37477495 (-)
XLOC_034917 NA non-coding downstream 1456530 36640564 ~ 36684136 (-)
XLOC_034937 BX571680.1 non-coding upstream 397260 38539306 ~ 38540433 (-)
XLOC_034938 CR318601.1 non-coding upstream 431871 38573917 ~ 38577255 (-)
XLOC_034918 NA non-coding downstream 1493383 36642632 ~ 36647283 (-)

Expression


Co-expression Network