XLOC_034933 (slc7a10a)


Basic Information

Item Value
gene id XLOC_034933
gene name slc7a10a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 38315647 ~ 38340674 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067927
GTCCTGCATCAACTCGCTATATGAGAGCGGGCGCGGATACAGATGCCGTTTTCTTGAACAGCCGCACAAATGGATGGAACCGAAACGAACCGGAGAAACTGCGCGAAGTCGGAGCAACAGAAGATGTTGGACTCCAGAGGAAACCAAAGTGGATCTAAAGACAGAGTGACTCTTAAGAAAGAAATTGGTCTTTTGAGCGCGTGCGCCATAATTATAGGCAACATCATTGGCTCAGGGATCTTCATCTCTCCAAAGGGGGTTCTGGATCATGCTGGCAGTGTGGGGTTCTCACTCATCGTGTGGGTCCTGGGAGGCGGAATCTGTGCCCTGGGATCTCTTTGTTATGCTGAGCTGGGCGTCACCATCCCCAAATCAGGTGGAGACTACTCATATGTGACAGAGATCTTCGGGGGACTGGTGGGCTTCTTGTTGCTGTGGAGTGCAGTGTTGATCATGTACCCAACGACTCTGGCTGTGATTGCGCTCACCTTTTCCAACTATGTTCTGCAGCCTGCCTTCCCAAACTGCCTGCCTCCATACATCGCCACCCGACTCCTCTCAACCACCTGTGTCTtgtTTCTGACTTGGGTGAACTGCTCTAGTGTGCGCTGGGGGACACGGATCCAGGATGTTTTCACTGTAGGGAAGCTGCTGGCCCTTGTGCTCATCATTGTAGTGGGAATGGTCCAGATTGCCAAAGGACACTATGATGCACTGGAGCCTCAGGCAGCATTTGAGTTCATAAAGGATCCGTCAGTGGGACAGATTGCTTTGGCGTTCCTGCAGGCGTCATTTGCCTACAGTGGTTGGAACTTCTTGAACTACGTCACAGAGGAGGTGGTTGAGCCTCGCAAaAACCTTCCACGTGCGATCTACATCTCTATCCCTCTGGTGACGCTCGTCTACACTCTCACCAACATTGCCTACTTCTCCTCCATGTCTCCTCAAGAGCTGCTGGAGTCGAATGCTGTGGCTGTGACGTTCGGAGAGAAGCTGCTAGGGATGTTCTCCTGGGTGATGCCCATCTCTGTTGCACTTTCTACATTCGGAGGGATTAACGGATACCTGTTTACCTCTTCTAGGTTATGTTTCTCAGGGGCCAGAGAGGGCCACCTGCCGTACCTACTGGCCATGATCCACCTGAAGAGCTGCACACCCATCCCTGCCCTGATCGTTTGTTGTACAGCAACCATAGTGATCCTGTGCATCGGGGACACACATAACCTGATAAACTACGTGTCTTTCATAAACTACCTCTCATATGGAGTCACTATAGCCGGGCTACTTTACTACAGATGGAAGAAACCCAACATGTTTAGACCCATTAAGGTAAACCTGTTGGTGCCGTGCAGCTATCTGGTGTTCTGGGCTGTGCTGCTGGGCTTCAGTCTGTACTCGGAGCCAGTGGTGTGTGGGATGGGGCTGGTGATCATGCTCACTGGAGTCCCCATctatttcattggagtgcagtggAAGAACAAACCACAGTGGATATACAGCGCAATTGagagaGTCACCTACCTGGGGCAGAAGATGTGTTACGTGGTCTTCCCTCAGGACGATCCTTCTGAAATCCAGCCTCTCACAGAGAAATCGGAGCTGTGAGCTTTAGCCAAGGACTCCTCACACTCCTATTTTGCAATAGCAAAGACCTGTTTCCATCCGTTATAGAGTGTTTTTTGATGCTGTACTTGAGGAGACTCTCCTCCGAGACTCAGCCATCACAGCAAAAGAAACTGAAGTTTTACATTTATCTCAGACATCACATTTCTTAGTTCTCCCCTCGCATACATTTGTCTGGACATCAGCTTGTGTCTGAACGCACCCTCCTCTGTTCCTGTTTGAGATGAATTCCTGTTTTCTCTGGGAGTTGTTTTTGAGAACTGTTGGTGTATTCTCATGTGCCTTACAGGATCTCACTCCGTTATTGAAGTTTTTATTGTCAAgtagacagtttttttttaattagcaatcTCCTGTGAGTAAACAAAGGGGACTTGTTGAAGCTTCATAACCCAGAAATCTAAACACCATCTGTGAGTCTGAACTTTCTCACTTTATCCTTTTAATATTATTGACTTAAGCCCTCTTAAGTGCAATGCAATAACTTCTAGCTATGCTCAAAAAGTCTATGCAAGTATAGTTTAGGCACTTTAATGTAGTTGCGTACAGTACTTTTAGCTTATATTGCACAATAATTTTATTGCCATGCTTTCTGAATGAGCTCCAATCCTCAGCCACTGTTTAACAGAGGCTCTGCCCCAACAAACATTAGCACTGCCAGTGTCTTAGCCTTATGCTAATGACAGGAACAACAGGAGGTTCCTTCTTTTTAGGTAATGTTATTGACATAAAAGGTGCTTTAAATTTGAAAGAGTCCTCTTAGGTAGATACCTTCAACTGTTGTCCAAAAGAAGATGTGTTTCTTCAGCCATTTAGCgtcttttttatattaaatgccGTCCATTTTGACAgggatgcatttattttattttgggcaCTGATCTTGGACATTCCTCTGAGCTATGCAACAGCGATGATCTCAATCTCTTCATTTCAAACTGATCACTCGTGTCCATCCAAACACATTCGGAGATACTAGACTCGTGATTAGCAGCTAATGCACTTACACGCCACTTGAGCGCCCTCTCCTGGTGCAATCTTTCTATAAACGATAATACGCTCAGTACAGCCAGTGCTGCTCATCTCTTCCCATGGGTCCAGCTCAGTCATGTCCGTCAGACTAGCAGTGTTCAAGCTCTCACTGCCCATAGTGGCAAAGCACAGTACAGTGAAATCTTAATGTAAATACTGCATAAAGTTTCAAATACATCAGGGATTCATTGTGAGATTGCATTCCTGACATTAGTGAAGCGTGAGGCGTTTGTATTAAATATTCATTCGTTCCTATTGTATGCACTATAGATATGTATGCTGATATActtgtgttttgtaaaaaaaaaaaggttaaaatatgTTTATCAATAACAATATTAGCACATTAAATTTAATTCTGGAAATGATG

Function

symbol description
slc7a10a Predicted to enable L-amino acid transmembrane transporter activity and neutral amino acid transmembrane transporter activity. Predicted to be involved in D-alanine transport; D-serine transport; and amino acid transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC7A10 (solute carrier family 7 member 10).

GO:

id name namespace
GO:0015804 neutral amino acid transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0042941 D-alanine transport biological_process
GO:0042942 D-serine transport biological_process
GO:0003333 amino acid transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015175 neutral amino acid transmembrane transporter activity molecular_function
GO:0015179 L-amino acid transmembrane transporter activity molecular_function
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080116-1 Predicted to enable L-amino acid transmembrane transporter activity and neutral amino acid transmembrane transporter activity. Predicted to be involved in D-alanine transport; D-serine transport; and amino acid transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC7A10 (solute carrier family 7 member 10).

Ensembl:

ensembl_id ENSDARG00000008100

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067927 True 3025 mRNA 0.45 11 38315647 38340674

Neighbor

gene id symbol gene type direction distance location
XLOC_034931 NA coding downstream 57787 38202545 ~ 38257860 (-)
XLOC_034932 NA coding downstream 66515 38237231 ~ 38249132 (-)
XLOC_034930 abcc12 coding downstream 132316 38158604 ~ 38183331 (-)
XLOC_034929 NA coding downstream 173601 38140666 ~ 38142046 (-)
XLOC_034928 cebpa coding downstream 227782 38084986 ~ 38087865 (-)
XLOC_034934 BX323855.2 coding upstream 17241 38357915 ~ 38395068 (-)
XLOC_034935 zgc:165481 coding upstream 115752 38456426 ~ 38477235 (-)
XLOC_034936 celf1 coding upstream 195260 38535934 ~ 38570940 (-)
XLOC_034937 BX571680.1 coding upstream 198632 38539306 ~ 38540433 (-)
XLOC_034938 CR318601.1 coding upstream 233243 38573917 ~ 38577255 (-)
XLOC_034927 BX323060.3 non-coding downstream 276601 38036841 ~ 38039046 (-)
XLOC_034923 BX664719.1 non-coding downstream 621695 37693838 ~ 37693952 (-)
XLOC_034942 BX957297.2 non-coding upstream 308914 38649588 ~ 38651305 (-)
XLOC_034948 BX957256.1 non-coding upstream 415652 38756326 ~ 38767909 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_10487830_10511296 SLC7A10A, SLC7A10 coding CI01000026 null 10485815 ~ 10512739 (-)