XLOC_034948 (BX957256.1)


Basic Information

Item Value
gene id XLOC_034948
gene name BX957256.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 38756326 ~ 38767909 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067968
agagagagagagagcacgagCACGCACGATCgacaaaaacatgctgaatcaaaactttttaaaatcctcaaTCAATATTTGAGTTACCTTTGCACAccggagaaaggatgacacaatagctaaaggatttctcttagacggACTGGAAGATCATTCGTCATCTCCCGAATCTGTTTTTTCAATGACTTTTTTCATCCAGCGCCGCATTCGGAACAActtttagAACAAGCAAAAGAAATCCATGAAGGAATTTTTGGAGGGCTCACTTAGTACGAGAGTGTTTTCCAAGGCGGACGATGATGTCATTGATTGTGAAGTTCTTGTTCCACGGCGGGTAGAGAATGCAGTGGGCAGCGGTGAGAATCCATTCATCACTGATCAGACTGGCTCCACACAGCAGCTCCTGAGGGCTACGCTTATACAGCATCACCTGCCTGCAAATCACATCAAACAACCATTGCAAAGAGGCTTTTTATCACTTTCCAGAACATTTACAGTTACTGTTCCTCACTGAAGGAACTCTCTCCAATCACATACAGATTTCTGAAACACAAGCAATGTTAAAAACCTATAATAGCTTGTATTTCTCTATCAAAATGAGAAGCTTTGTATTTGAAGCACTGTGAGTATTGTTTCTTTACAATGAATCACTTGATGTCTCCTCTTTGTAAGTCACTTTTTATAAAATCACCTGCTTAATGTCTAAAGCAGGCATGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099388

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067968 True 718 lncRNA 0.41 3 38756326 38767909

Neighbor

gene id symbol gene type direction distance location
XLOC_034947 fbxo3 coding downstream 41764 38703338 ~ 38714562 (-)
XLOC_034946 cd59 coding downstream 57662 38695719 ~ 38698664 (-)
XLOC_034945 aplnr2 coding downstream 66764 38685545 ~ 38689562 (-)
XLOC_034944 c6ast1 coding downstream 91357 38661107 ~ 38664969 (-)
XLOC_034943 npsn coding downstream 96849 38653481 ~ 38659477 (-)
XLOC_034949 si:dkey-23n7.10 coding upstream 19922 38787831 ~ 38792543 (-)
XLOC_034950 atg13 coding upstream 25923 38793832 ~ 38807827 (-)
XLOC_034951 phf21aa coding upstream 53529 38821438 ~ 38861741 (-)
XLOC_034952 CR382325.1 coding upstream 210093 38978002 ~ 38980678 (-)
XLOC_034953 CR356225.1 coding upstream 368741 39136650 ~ 39136774 (-)
XLOC_034942 BX957297.2 non-coding downstream 105021 38649588 ~ 38651305 (-)
XLOC_034938 CR318601.1 non-coding downstream 179071 38573917 ~ 38577255 (-)
XLOC_034937 BX571680.1 non-coding downstream 215893 38539306 ~ 38540433 (-)
XLOC_034934 BX323855.2 non-coding downstream 361258 38357915 ~ 38395068 (-)
XLOC_034932 NA non-coding downstream 507194 38237231 ~ 38249132 (-)
XLOC_034955 CABZ01033553.1 non-coding upstream 467086 39234995 ~ 39235112 (-)
XLOC_034958 BX842701.1 non-coding upstream 669475 39437384 ~ 39441050 (-)
XLOC_034962 BX908792.1 non-coding upstream 947803 39715712 ~ 39716073 (-)
XLOC_034931 NA non-coding downstream 498466 38202545 ~ 38257860 (-)

Expression


Co-expression Network