XLOC_035512


Basic Information

Item Value
gene id XLOC_035512
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 14558645 ~ 14561430 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072165
tggtttgagAAATGATGAGATCTTTATTTACAATTTCCAAAGGATCAGTTGAGTTAACAAATATATCTATAATATGTACATGGAAGCAGAAGGAACCACGTCCGTTTTCACAGCAATCTTCCATGAGTCCACTCACAGGAGATGTAGGCATCGACTCTATTTACATTGGGTGAAACAATTTACAAGTCTTCAAGTGCACCTCTGTCACTCACAgtacattattaatataaatattacagacACATACTGGATGCAAAACATTTCTACGGCCTACCAATTTGAAAGTAGAAACTGATTATCAAACCATTTGTGCCACACAAATCCTAATATCCCACCCCCCCAATCCAAGGCAGAGAGTTACCGCCTATAGTTAATGAAAGTTGAAACATATTAGAAACCAGAAAGACTATTTAATAGTAGCCTGTTCTCTGAACGAGGTAGAGATCTCCGTTACCTACAGAATTTGACATGCAATTGAATGAGCAACTGATGCTAGGGTATCAGAGACTCTATTGCTGCATAGATGAAGTTTAACGCACTGACACGGCACAATACTCTAGATCTAACCTCACAATGCAGGAAGTATATAGCTTCAAGAGATGGTGAGGAAGGGCTTGTTCCAGCGAAATAAACATCTAATACATTATACGTTTCTTATGAACCCAGATTTATGCATGTACATCACAGTATTCATGTATATTAACAGAACGCGGTCATGAAGACAAGATGGACGTGCTGAGCCCTTAAAAGGTACATAATGAGTATATAAAACGCCTCttttaaaagtaaacaaacattGTGCTAGTGATAGCGTAACATTGCCATTCATCTTTCATTTAAAAAGGTTCTTATGATGGGTAAACACACAAAATAAGGCAGAAATGTACATCTGTTACAGTATTAGAGGTTTGTCCAGCTACGGAGTAATAAGTTAAGACAAGATTAAAGCCAAAAAAAGGGACCATCACAACACAAATGAAGGCTGGGGAAAAGTTGCTCGTGCAAGAGCAAACATAACAACGGAGGCACTTAAAATGAATGGGGTAAAAGGCAAATGTTAAGGCTAGAACCCAGCATGCCTGCATTTAGCACAGTTATTTCAAATTCAATCTTTTGGCAATTTGTAGTCACCAATAAAACTGTTTGAACGAGCAAAACCACCACGAgaacagttttgttgttgttgctgcttcAAAAAGCAGAGATAAATATCATTTACACGTTTTCAACGTTATCTTGCATCAGATCCCTTTACAATGTATTGCCATTTAAACATTCAGATTGTACATATTGTGCTTAGTTCTGCAATAAATCAATCACGTCAATGGTAAAATAATCTCTTTTCTTTAAACACTTTCCAATGTTACTTTCAAATTCAAaggttacttttttaaaaataagttaatagaattaaaggaagaaaaaaacattatgatacaatgtaattaaaaatactcGGTGAGTCTTCAGGTCTGTTCCGATTTGATCTGACTCATTTGTATTTTAATCGTAAGACTTGAGCCAGTTTTAGCAGCAATGATAAACAGACGCAGTATGGGGAATCTACACCCAAACATCTGCTACAATTTACACCACATAAGAGGAGAGTTCATTAGACTTCCCGGAACAGGTATCTCCACGACAGGTCAGACTTCTAGGCAAGGTGTTATGGCCTTGAATCCTGAACCCACAACAGGTCGTGGACAGCACATGTAGACTCAAAGAGAACTCCGCACTGAATGTCCTTTATGCCAACAATGAaacctctctttttttttttttttttttttttaaatcagaaagtaCCTAAAACATTTTTTCTGTACAAACAAGAGCATCATCAAAGAGTTGTTTTAAATTTCTTCTCTTGGATTTGGGTCAGAACGTCAGCGGTGTCTTTTAGCAAGGCATCAAAAATCCCATCAGCTAGCTGCATCTTTACAAAAAGTTCATCCTCATCATAGTTGACCCACTGGGATTCCTCTTCATGCAACTCCTGGACCTAGAAGAGGAAGAGGGATTGTGGAATTATGCATTTAGTAAGCCTAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072165 True 2049 lncRNA 0.37 2 14558645 14561430

Neighbor

gene id symbol gene type direction distance location
XLOC_035510 acbd6 coding upstream 116833 14381272 ~ 14441812 (+)
XLOC_035511 BX294388.1 coding upstream 142822 14415698 ~ 14415823 (+)
XLOC_035509 NA coding upstream 312292 14241585 ~ 14246353 (+)
XLOC_035508 tpk2 coding upstream 388069 14158021 ~ 14170576 (+)
XLOC_035507 ugt5e1 coding upstream 498401 14058646 ~ 14060244 (+)
XLOC_035513 NA coding downstream 51556 14612986 ~ 14652650 (+)
XLOC_035514 cacna1ea coding downstream 149112 14710542 ~ 14828450 (+)
XLOC_035515 CR450798.1 coding downstream 244744 14806174 ~ 14806290 (+)
XLOC_035516 si:dkey-21p1.3 coding downstream 294041 14855471 ~ 14883692 (+)
XLOC_035517 soat1 coding downstream 325022 14886452 ~ 14910223 (+)
XLOC_035505 CT025854.1 non-coding upstream 538506 13971417 ~ 14020139 (+)
XLOC_035506 NA non-coding upstream 551838 14002077 ~ 14006807 (+)
XLOC_035503 NA non-coding upstream 759276 13794981 ~ 13799369 (+)
XLOC_035525 BX510319.1 non-coding downstream 915195 15476625 ~ 15479807 (+)
XLOC_035527 NA non-coding downstream 1698156 16259586 ~ 16265811 (+)
XLOC_035529 NA non-coding downstream 2002523 16563953 ~ 16582042 (+)

Expression


Co-expression Network