XLOC_035529



Basic Information


Item Value
gene id XLOC_035529
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 16563953 ~ 16582042 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00072168
aaagtactataaattactaaattatttttatatgggTTTGTAAAATCATATTGTTTACATGATTTATTTGAAATACTGCAATATGGAATGTTGATGgaacttttcatttaaaatattgcaattattTGTCACCTGACATCATCATGATTTAGCGATTATGcactttaatctagttttgaacacACAATTACTTTTCTAATCGTCTCAACTTACatcaatcttGTAAGAATACTTTAACTAAagttaaaattagttgaaacctgattaacaaAACGTTTGTTCATGATAATTTGTGATATAATTTTTCATTGCACAATGCCGATCAAAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00072168 True 328 lncRNA 0.25 2 16563953 16582042

Neighbor


gene id symbol gene type direction distance location
XLOC_035528 cdkn2c coding upstream 149067 16407884 ~ 16414886 (+)
XLOC_035527 NA coding upstream 298142 16259586 ~ 16265811 (+)
XLOC_035526 elavl4 coding upstream 446841 16004154 ~ 16117112 (+)
XLOC_035525 BX510319.1 coding upstream 1084146 15476625 ~ 15479807 (+)
XLOC_035524 dnttip2 coding upstream 1277644 15277874 ~ 15286309 (+)
XLOC_035531 NA coding downstream 27636 16609678 ~ 16613471 (+)
XLOC_035532 si:ch211-198n5.11 coding downstream 94852 16676894 ~ 16688511 (+)
XLOC_035533 NA coding downstream 137065 16719107 ~ 16721376 (+)
XLOC_035534 smim15 coding downstream 144344 16726386 ~ 16730368 (+)
XLOC_035535 ercc8 coding downstream 156240 16738282 ~ 16757285 (+)
XLOC_035515 CR450798.1 non-coding upstream 1757663 14806174 ~ 14806290 (+)
XLOC_035513 NA non-coding upstream 1911303 14612986 ~ 14652650 (+)
XLOC_035512 NA non-coding upstream 2002523 14558645 ~ 14561430 (+)
XLOC_035537 CR925863.1 non-coding downstream 190132 16772174 ~ 16810253 (+)
XLOC_035539 NA non-coding downstream 473837 17055879 ~ 17059377 (+)
XLOC_035542 NA non-coding downstream 504949 17086991 ~ 17126339 (+)

Expression



Co-expression Network