XLOC_035581 (znf692)


Basic Information

Item Value
gene id XLOC_035581
gene name znf692
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 19977712 ~ 20001065 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069765
TACTCTGGAAATTAAGATTTAGTTCCTGTAATAGCCTTGATTTGATGAACTCTtgcaatattaatatatattttttaatgtagcGGCTTCTTAATTGTGTGGTAAATGTGATGTTATTTGCACTGGGTTCAGCGATAATCTGTTGACAGACTGATCGGCTGATCTTAAAAGGGCAACACTTCGAGCGAGCGGGCCCCTCAAGGAGCTATCGCAAGGGACTCATTTAAGTGTGGTCTGAGTGGCACCGCTCAGCGTGATGTCATCCACTAAAGAAACTGTGCTGCGTCAGCGCCGCCGGGAGCTGGACGCCCGCAGGAGTAAGTCTCGCGTGCGTCTGGGCTCGTGTCTGCAGAGCTGGGCTCAACTCAAAGATAAACTGGGCTTCTCTCTTCACTCGGAGCTTGCTCAGCATCTGCTGGAGAGCTATGTTTCAAGAGTTTGTATGAAGTGTTCAGGTGATGGGAAAGAAGAGACTGTATCAACTACAAAGGAGTCTTTGCAGGAACTCATCTTGATGGTCCACAACCATGGACAGACGTGTCCCCTTCCTCCTGTCCTGCAGTGTAGGCCtgttcaaaaaacaaaactatcAACACGCAGTCAGAGTGGAAGAATAGAGGCTGCTACTGAGCCCAAGAAATTAGCAGAAGCGGATGAGTGTTTTAAATATACATGTGAAGATGGACATCATTTTATGTGGTGTCCTTTTAACCTGGAGAAGGTACTGATTTCTAAAAATGAAGGAGATAAAATTACATCCGAACAAGGCAAGAGACAGATGAAGGAACCAGTCACAGATACAGAAAGACAAGAAATGATGACTAGATTAAAAACCAGACAGCAACAGAGAGAAGATGCTGGCACTAACACAAATAAAATGCttggacaaaataaaaatgcagATGTTACAGAGACTCTTGAAGCACAGGACAAAAATGATCTGGCATCTGATTTTTCTTATTCAGAGCATGGATCTCCAGCAGACAGTGATGAGATGACTGTAGATGTTCCTGTCAGCCATACTGATAGCTATGAAGAATTTGCAGTGCTGAATTTAACCAACAGAGGGACCCAAAGTAGTGCAGATCATACTGAGAAACTTAGCGTCAGCAAAAAGGCGGGAATACTTCAAAGTAACAGTTCACAGTCGTTGAAAAAGGATATGTCTCAGATTGGGGGCAAGAGGAaaagAAAATCAACATCCAAATTAATTTTATCTTGTGAGTTTGATGGCTGCGATAAGATTTTCTCCAGTCGACAATATTTAAATCATCATATCAAATATCAGCATCTGCATCAGAAGACCTTCACCTGCTCGCATCCCTCCTGCAGAAAGTCCTTTAACTTTAAGAAGCATCTGAAGGAGCATGAAAAGTTGCACAGTAATCAGCGAGACTATATCTGTGAGTTCTGTGCTCGGGCGTTTCGAACCAGCAGTAACCTGATCATCCACCGCAGGAtacacaccggagagaagccgctGCAGTGTGAAGTGTGTGGCTTCACCTGTCGACAGAAAGCCTCTCTGAATTGGCACATGCGGAAACACAATGCTGAGAGCACCTACCAGTTCCCTTGTGAGATCTGCGGCCGTCGCTTTGAAAAGAGAGACAATGTTACGGCTCACCGTAGCAAGAGTCACCCAGACTATAATACAGGCACTCTGGAAAGATCTCTTCCCCTTCCTCCCTCTGACCCACTCCTGCATCCCTCGAGGCACCGCGGATCTTCCCCTTCTGTTTCCAAGAATCAACCCACTGCAGAATAA
>TCONS_00069766
AAAGACAGACAGACGCAGAAGTTAGGTGTGTGGCTACAGGTCAATGTAGAATTTGAGTAAGTATGATCAGCGAGACTATATCTGTGAGTTCTGTGCTCGGGCGTTTCGAACCAGCAGTAACCTGATCATCCACCGCAGGAtacacaccggagagaagccgctGCAGTGTGAAGTGTGTGGCTTCACCTGTCGACAGAAAGCCTCTCTGAATTGGCACATGCGGAAACACAATGCTGAGAGCACCTACCAGTTCCCTTGTGAGATCTGCGGCCGTCGCTTTGAAAAGAGAGACAATGTTACGGCTCACCGTAGCAAGAGTCACCCAGACTATAATACAGGCACTCTGGAAAGATCTCTTCCCCTTCCTCCCTCTGACCCACTCCTGCATCCCTCGAGGCACCGCGGATCTTCCCCTTCTGTTTCCAAGAATCAACCCACTGCAGAATAAGAGTTGTGACAACAGTTTGAACACTCTTGACCTCAAGCAATCTCTAATGTGGGATTGGTTGGTAAACAAAATCTCCATGCGGTGCCTTAATAATGTTGTTAgttcttattttgtttttgttttttagatttttttcagagACCGTGAATAGACCATCAGTATACACAGAACAAAGACTTCAGACTGTGCATGGTGGGAGGAAGTTGCTGTGACAGATCACAATAGTGGTGGACGAAGCTGGAGATGTTTTGTGCctcatgtaaaaattaaaaattgact
>TCONS_00069767
TGTGCTTCTTTATGTCTGTGAGATCAGCGAGACTATATCTGTGAGTTCTGTGCTCGGGCGTTTCGAACCAGCAGTAACCTGATCATCCACCGCAGGAtacacaccggagagaagccgctGCAGTGTGAAGTGTGTGGCTTCACCTGTCGACAGAAAGCCTCTCTGAATTGGCACATGCGGAAACACAATGCTGAGAGCACCTACCAGTTCCCTTGTGAGATCTGCGGCCGTCGCTTTGAAAAGAGAGACAATGTTACGGCTCACCGTAGCAAGAGTCACCCAGACTATAATACAGGCACTCTGGAAAGATCTCTTCCCCTTCCTCCCTCTGACCCACTCCTGCATCCCTCGAGGCACCGCGGATCTTCCCCTTCTGTTTCCAAGAATCAACCCACTGCAGAATAAGAGTTGTGACAACAGTTTGAACACTCTTGACCTCAAGCAATCTCTAATGTGGGATTGGTTGGTAAACAAAATCTCCATGCGGTGCCTTAATAATGTTGTTAgttcttattttgtttttgttttttagatttttttcagagACCGTGAATAGACCATCAGTATACACAGGTCAGTATTTGACAAATTGAGtacgcttacatggacaccaataatctgatctGAATactattaagacaatactctgattgatagtctaccatgtaaacagcgagttttgattaatttaataaaattaagacATATGCTGATTTTAgccgcattattgaagtgcagtacagacatgtaaactaTGTCAAACTATTTTCATCATGTAGTTTtatcgcattttgtgacaggatagtctatacacacacacgactgtttgacactattctctgcacctaccaagtcagtgaaggaccacagacatctGCATCGTGAAATGCGGAGATTCTTTTTTC

Function

symbol description
znf692 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF692 (zinc finger protein 692).

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-484 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF692 (zinc finger protein 692).

Ensembl:

ensembl_id ENSDARG00000078434

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069765 False 1768 mRNA 0.45 12 19977712 19997768
TCONS_00069766 False 727 processed_transcript 0.46 4 19993533 20001065
TCONS_00069767 True 905 lncRNA 0.43 2 19997209 19998268

Neighbor

gene id symbol gene type direction distance location
XLOC_035580 BX901930.2 coding upstream 11835 19965223 ~ 19965877 (+)
XLOC_035579 BX901930.3 coding upstream 18594 19958485 ~ 19959118 (+)
XLOC_035578 BX901930.1 coding upstream 25332 19951733 ~ 19952380 (+)
XLOC_035577 NA coding upstream 27379 19739003 ~ 19950333 (+)
XLOC_035576 NA coding upstream 295061 19680430 ~ 19682651 (+)
XLOC_035582 fcho1 coding downstream 36303 20037368 ~ 20072776 (+)
XLOC_035583 acsbg2 coding downstream 139256 20140321 ~ 20192151 (+)
XLOC_035584 NA coding downstream 193127 20194192 ~ 20196205 (+)
XLOC_035585 BX664738.1 coding downstream 228640 20229705 ~ 20240869 (+)
XLOC_035586 zap70 coding downstream 392185 20393250 ~ 20414364 (+)
XLOC_035573 NA non-coding upstream 262022 19663454 ~ 19715690 (+)
XLOC_035592 BX323082.1 non-coding downstream 563556 20564621 ~ 20580582 (+)
XLOC_035593 NA non-coding downstream 584926 20585991 ~ 20590845 (+)
XLOC_035595 NA non-coding downstream 823818 20824883 ~ 20856485 (+)

Expression


Co-expression Network