XLOC_035584


Basic Information

Item Value
gene id XLOC_035584
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 20194192 ~ 20196205 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072190
ttttgcaataaaaacataaaaagtaacatcTTTTGCCCTTATTACAACTTGCATCAAATGACCACATGGTGGCACTGTATGCCAAGTTTAACACGTCATACTAAAGGTAACTCCTCTGTTCAGACCGCGGAAGGTTACCAGAACATACATACAAAACCCAAACCTCCCCGAAAACCACGGATAAATACAGCAAGTCCTTCCGCGCTCACGAACACAAATAAAACCACCACTGACTGACAAAACACAGCTCTCTGCACCTGCAAGCCAAGTGTAAATATGATGTAGTATTAACCGTCtattaaattaaagaatgaatcCTCCAGCTCCTGTATGCAAGActcacaaaattattagcccctctgttagTTACTTTGCCGCGTTACAGCTTAAACTAGCTGCTCTTAGCTTGTTTAACCAAATAACAAGTGCTCAGAAACCCCGTTGAgagaaataattattaaaaaaggacCATCATCTACTCaatcttcacttgttccaaacctgtttgagttcgtttcacaaaggagatattttgaagattgttggaaAACTGGtagccgttgacttccatagtatgttttcCTTTTCATAGgacttaaactcaattcctggagggccgcagctctgcagttttgctacagccctaatcaaacacagctgatgcaactaatcaagcTGTTCAAGACTCTTTTGACTAGGTTTGGAGCAAACCTGTGCAGAGctacagccctccaggaattgagttcaaGACCGATGCTTATTATGGACGTCAATCATTTTCCAAGATTCTTCAAAAATATGTTCTTGAAAAAGTCCTCaaaagtttgaaaccacttgacgattgattaaatgtttttttctgagtgaactatcccaATAAGACCAGCAAGCTTGATTTAAATCAAACACCTTACAAACAACAAATTGTTTGTTTCACAGATTTGCAGTCCTCCTTTTGTAGTGAATGATTATAACGAGACTGCAACTAAACAGATGCTTGATGCAGAAATTCAACTCTAACGTTACAGCTTTGGGGAAAAAGAAAGAACACTTGAAAACTCTCAGCTTTCCTTAATTTATTTCTGACATTTCTTccgaatattaataaataaactgttttagagcatttgttttgatgttgtttaaataaaatgacaactAGTTAAAGCAAAAAATGTGGCATATTTTTATATCAAggatgtttataatattttttaaacaaaaattatcaATGTTTTAACTTGAGAACCATTATGagatcaatatttggtggaatagcCCAATAAAGCATTTGTTATTCTAACAAATTGCCATTTTCTGGAAGAAACactgctctaaatgacaatatttttattctggagaaattTGATCACACCTTTACAGAATGAaacaaatgttaacattttacCTTTAGCCACACCGAATAAATCAAGAGAAACTGAGAACTGTCAACTAGTCTCTTACTCTTTTCCATACCTGTACAAACACACCCTGCCATGAATTGGGCTGAAGTAACAGTTTCAAGTTCTCAAGGTCATGTTTACAGTCATTTATGATATAATGTGCtgatacagagaaaaaaaaacaaaaaaatctggcAATTCTtgacacaaaaaaagacaaattaataTATTGCATGTAAGTATTGtataaaattctttaaaatacagtttagAGAATTAAGTACTTGAGTCAACAAAGCCAAAAGTGCAGaggtacataaataaaaaataaacccctcaaataatattaaaaaaccgtgtgtgtgtgtgtgtgtgtgtgtgtgctcagtggGGTGTCTTTTCAGAGCTGCCATTCAAGTTCGCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072190 True 1827 lncRNA 0.35 2 20194192 20196205

Neighbor

gene id symbol gene type direction distance location
XLOC_035583 acsbg2 coding upstream 2041 20140321 ~ 20192151 (+)
XLOC_035582 fcho1 coding upstream 121416 20037368 ~ 20072776 (+)
XLOC_035581 znf692 coding upstream 193127 19977712 ~ 20001065 (+)
XLOC_035580 BX901930.2 coding upstream 228315 19965223 ~ 19965877 (+)
XLOC_035579 BX901930.3 coding upstream 235074 19958485 ~ 19959118 (+)
XLOC_035585 BX664738.1 coding downstream 33500 20229705 ~ 20240869 (+)
XLOC_035586 zap70 coding downstream 197045 20393250 ~ 20414364 (+)
XLOC_035587 mob3a coding downstream 219619 20415824 ~ 20429843 (+)
XLOC_035588 mknk2b coding downstream 242679 20438884 ~ 20450375 (+)
XLOC_035589 rexo1 coding downstream 258929 20455134 ~ 20471546 (+)
XLOC_035578 BX901930.1 non-coding upstream 241812 19951733 ~ 19952380 (+)
XLOC_035577 NA non-coding upstream 243859 19739003 ~ 19950333 (+)
XLOC_035576 NA non-coding upstream 511541 19680430 ~ 19682651 (+)
XLOC_035592 BX323082.1 non-coding downstream 368416 20564621 ~ 20580582 (+)
XLOC_035593 NA non-coding downstream 389786 20585991 ~ 20590845 (+)
XLOC_035595 NA non-coding downstream 628678 20824883 ~ 20856485 (+)
XLOC_035599 CU861651.1 non-coding downstream 741775 20937980 ~ 20940847 (+)
XLOC_035573 NA non-coding upstream 478502 19663454 ~ 19715690 (+)

Expression


Co-expression Network