XLOC_036027


Basic Information

Item Value
gene id XLOC_036027
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 50256786 ~ 50273478 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072289
atgcaatgtaacttaaattcaacaactggaccatcaaaatagagtgtGACCTATTTTCCtaccaatatttatttattcttctatAAAAGAATTGATAAATATTGAtagaaaaatgtattttgattaaaaGAAGAAGTGTcgtttgattgaaaaaaaaatactttattacaTGGTATACAAAACTGTACACAAGATTTATTAGAAAAATCACCAAAATAAagaatattattaacaataatctGAGAGAGTCCCCATAGTCCAATGTCCTTGTCATCACAGTGCTGGTCTCCACATGCTCAGTCCGTGTAAATCATACACATACGGCCGGTAAGGGGAGGATTTATAGACTGTCGCTAAAAGCGATGCTCTGAAAAAGTCCTCTTCTGTAGCAGCCATAGCAGCCGCATTTGATTTCTGGAAGTAGTCCTTGCTGTGCTCTGTGGTTAACTGTCTCCGTTTGGTTTTATATCTCCTGTTCTGGAACCAGATTTTGACCTGAGTCTCTGTTAGGTGCAGCGCGCTCGCCAGGTGTGTGCGCTCAGGTGCGCTCAGGTACCGCTGACGGCTGAACTTCTTCTCCAGCTCCAAAACCTGCATGGGATACAATTTGTTActgcactgtaaacaatgctgggttcccaataatcgatttgtgttggggttACATAAAGGAATTTGgttaacttgttagttttttactaatttaagtggattaaatgtaaattaattaagttgtgcCATAATTAACTCAataattgttgtttcagctctttttatacagtataaaagTAGAATTTTGAGTGTATAAAGGTAAAATATCAGATAGTTACactaataactttattttttatattttatccacaaaaaaaaattcaaaaatccaCATCTAAATTATATATCTTTCCTctgtagtcatttatttatttttcctctttttgctcactctcactcactatcctttggcttagtctgtaattcatcaggggtcaccacagaggaatgaaccatcaattactctggcatatgttttatgcagtggataccctttcAACTGCATCCTTGCACTGAGAGTACAGGGAAATGTAAACActaattcatacacacacactcatacttttCCTCTTCATTTTtcccttattcattcattcattttccttcggcttagtctctgatttatcaggggtcgccacagcagaatgaaccgccaactattccagcatatgtttttcgcagcgAATGCATTTCCAGCTGCAAATCAGTACTgggaatatataattttatagacCATCTCAATGTAGTTGGCCCATGTACATTTCCTGTTTGTTACCTAACTGTAACAAGAGTTAAATCAATCGTATGTTCactttaaaacagctatcataacattatttatcaatatgtggacctttttggattctcagaagctatagaaattaaaaatgtaaaacaggaaatacattaggacccttgttattgtttacattccttAGTCTATATGTGTTATATATCTGCTCTGTTACATTACTATCATAATTGTTACTATCTTTTTCCTTTATGGGTTCCATTTCTGTAGGTTTGTTACTTGCATTAATATAAATAACTCAATTAATTAGTGAATAGAGCAATAAATACCTGCAGGTGCGTGAACGCGGCGCGCGACCGCTTCTTTTTCCCGCCTCCCCCCGTCATCTCTGTCGACGACACAGTTTTACCCTCTGAAGTCCGACAAGTATCCGCTGAATCTGTGAAGTAAATCACTCGATCACATGGATGAGCTGGAGACACTCTTCCTCCAT

Function

GO:

id name namespace
GO:0009888 tissue development biological_process
GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072289 True 1796 lncRNA 0.36 2 50256786 50273478

Neighbor

gene id symbol gene type direction distance location
XLOC_036026 slc25a37 coding upstream 38871 50190742 ~ 50217915 (+)
XLOC_036025 entpd4 coding upstream 76560 50150834 ~ 50180226 (+)
XLOC_036024 NA coding upstream 214971 50038691 ~ 50041815 (+)
XLOC_036023 gfpt1 coding upstream 219227 49975160 ~ 50037559 (+)
XLOC_036022 naa35 coding upstream 287602 49936585 ~ 49969184 (+)
XLOC_036028 rhobtb2a coding downstream 219617 50493095 ~ 50502243 (+)
XLOC_036029 NA coding downstream 235440 50508918 ~ 50514033 (+)
XLOC_036030 NA coding downstream 258225 50531703 ~ 50705652 (+)
XLOC_036031 egr3 coding downstream 453742 50727220 ~ 50733508 (+)
XLOC_036032 bin3 coding downstream 469497 50742975 ~ 50839564 (+)
XLOC_036019 NA non-coding upstream 633072 49616496 ~ 49623714 (+)
XLOC_036016 BX537103.1 non-coding upstream 876483 49378890 ~ 49380303 (+)
XLOC_036015 NA non-coding upstream 945970 49308636 ~ 49310816 (+)
XLOC_036014 NA non-coding upstream 1025443 49222114 ~ 49231343 (+)
XLOC_036035 CR855300.1 non-coding downstream 693328 50966806 ~ 50967999 (+)
XLOC_036038 NA non-coding downstream 887128 51160606 ~ 51165849 (+)
XLOC_036039 NA non-coding downstream 1308251 51581729 ~ 51586703 (+)

Expression


Co-expression Network