XLOC_003606 (CR457444.2)


Basic Information

Item Value
gene id XLOC_003606
gene name CR457444.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36554936 ~ 36561802 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007031
GGAAAATCACCTCAATCAGTCGACATTAACTGCTACTACTACAATACCAATGAGAGAGGGATTATTGAACCATATCATTCTCCTGCTGCCACAGTGACTGTTCTAGaCAGACTTCAGAAACCCTTCATCAGCGTTAGTGAAGATGATGATCTGCCCACAATATCATGTGAAATACCACTATCAGTCAGAGCTAATTTAACCTGTAGTTTCTATACTGAAGATGGAGCTCGTCTGTACAGAAGTCTCTCTCAGAGGAGTCAGAATGGAGACAAACATCTTTGTATGTTTTATCCAAACTTCCCCACACAGTCAGTGAACAGCAGACAAATAAACTGTGATTATACAACAGTCATCAAGACTAATTTCACATCACCACGGAGCGACACAGTCACCATCAGAGGTCTTTCTCAGGCCAGACTGTCAGCGTCTGCTTCAGTTCTTCAGGAAACAGACACAGTTGAGCTGAGCTGCGAGAATGCTGAAGATCTGGAGATGGAGATGTGTGTCTTCAACATTAATGGAAGAGAAAGTAACTCAAAAGCAAGTTTCTCTTGTCAGCTCTCACTCACTGCATCTCAGATCAGTGTTTGGTCAGAAGATCAGAGCTCATCAGTGAACATAACCTGCTTCTACACTGTGATGAAGAAAGGAGTTCAAAAACCATCTCCTCATTCTGATCCAGTGACAGTAACAGTCCAGCCTTCAACACCAACCACCACTGCAGATACAAATACAACAGCCCTAGAAACATATGTTTCTCGTGTTCAGACTTTCACAGCTCATAAAGACCAACCCATATCCAGATATGTTACATGGCTTATAATGCTGGTTTGTATTGGAATTGGTGTCATTTTTTCTGGATTCCTGGGAGTCATCTGTGTGTGCTGGTTTGCAAGTAAGTCAGGTTTAATTCAATAACATAAAATCCACAAAACCAGATGTGTCCAGTCAAGGAATTGATATGAGTGGTTCTGGAGAAGAAGAGATATATTATGTGACCACTTCTGGACCGGCCACATCTCAACCTGTATTTGAGGATGTTTCAGTCAATAAAAAACAACATGGAAATACAGCGGAGAGTGAGGATGTTTACCACCTGTACAGCACCATCCCTGATAAACTAGTTCAGTCCAGCGCTGGAGATCAAGAATACAATTTGATCCAGAAACACTGATGAGCCTCAAAACTTGTTTTATCATGTACAGAATATCAGTCGTACAGTACATGTAGAATCTTAacttaaaaacagatttttaatatTGGTTAAAATGGTTAACCAGAGAAAATGGGTTTCCTCTGCAGATGATAACCAAAAATAGCTTGGATGTTTcatgaaaactgaaataaaagatgtctaataaatGGAAAATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098581

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007031 True 1371 lncRNA 0.40 10 36554936 36561802

Neighbor

gene id symbol gene type direction distance location
XLOC_003605 CR457444.5 coding upstream 7667 36541551 ~ 36547269 (+)
XLOC_003604 CU928222.2 coding upstream 26514 36519971 ~ 36528422 (+)
XLOC_003603 CU928222.3 coding upstream 39613 36505674 ~ 36515323 (+)
XLOC_003602 CU928222.1 coding upstream 54130 36494094 ~ 36500806 (+)
XLOC_003601 ldlrad2 coding upstream 65120 36477481 ~ 36489816 (+)
XLOC_003607 CR457444.11 coding downstream 2808 36564610 ~ 36567407 (+)
XLOC_003608 CR457444.9 coding downstream 12573 36574375 ~ 36577618 (+)
XLOC_003609 CR457444.7 coding downstream 20456 36582258 ~ 36582372 (+)
XLOC_003610 CR457444.12 coding downstream 25527 36587329 ~ 36590488 (+)
XLOC_003611 CR457444.6 coding downstream 38440 36600242 ~ 36640855 (+)
XLOC_003369 CR854846.2 misc upstream 20431854 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 23842940 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 23860673 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 23869337 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 23874908 12679732 ~ 12680028 (+)
XLOC_003594 CR933559.1 non-coding upstream 408089 36052731 ~ 36146847 (+)

Expression


Co-expression Network