XLOC_003610 (CR457444.12)


Basic Information

Item Value
gene id XLOC_003610
gene name CR457444.12
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36587329 ~ 36590488 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007037
CAGCTCCTCATGGAGGTTCAGACCAACAACACACTTCAGAAACCCGTCATCAGTGTTAGTGAAAATGAGGATCTGCTCAGCATATCATGTGATATACCAGCTTCAGACAGAGCTGATGTGTCCTGTAATCTCTACACTGTAGATGGAGCTCTTCTGACCAGCCGTGACTCTCAGTGGAGTTCATCTGGAGAGCAACATCTTTGTATGTTTTATCAAAATCTTAGTGATCTCTTGAGAAGATCAGGACACATCAGACAGTTGAGCTGTGATTATTCACTCAAGACTAAACCTGGCATCAGATCTCCACACAGTGACCCATACACACTCAGAGTGCTAGACCTCCATTTCACGACAGACCTGCCAACcagcacaacaaagcaaacaatATTTTTAACAACAAGGTCCCGTCGACACTCTGCTTCACCAATCGACAAAGAAACATCAACAATCACTGTCATTTCCACGACTGAATCCTCAATGTCCACAAAACACGGTAACTTCTTTAACACTAATATTACTAGATTTCTATAACTACCTACCAAATGTCATTATTCAAgtcatactgtatttacatttgaaTCTTCTATTGAGGTTCTAGCATTAAGCTGAAAATGTCTGCCACTACATTTTAAGGTGTTTATGTGTAATATTTAAGAAAAGGAAAAATATAGCATGAAATTGTTGCTACATTAATGGGTTGAAAGGATGACTGTtcagaatttttcattttttacttgTGTTGTAGCCGGGTCTGAATAGATTGTCTTTCCAAACATGCAAAAATGAACAATTAGAGAAAAAACGCATTGAttcagtaaaattattttataatatattgtaCATTTAATGATAGGTCATCCTGGCACTTAAAtattcag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117702

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007037 True 878 lncRNA 0.37 5 36587329 36590488

Neighbor

gene id symbol gene type direction distance location
XLOC_003609 CR457444.7 coding upstream 4957 36582258 ~ 36582372 (+)
XLOC_003608 CR457444.9 coding upstream 9711 36574375 ~ 36577618 (+)
XLOC_003607 CR457444.11 coding upstream 19922 36564610 ~ 36567407 (+)
XLOC_003606 CR457444.2 coding upstream 25527 36554936 ~ 36561802 (+)
XLOC_003605 CR457444.5 coding upstream 40060 36541551 ~ 36547269 (+)
XLOC_003611 CR457444.6 coding downstream 9754 36600242 ~ 36640855 (+)
XLOC_003612 CR457444.10 coding downstream 21866 36612354 ~ 36613164 (+)
XLOC_003613 CR457444.4 coding downstream 62725 36653213 ~ 36656765 (+)
XLOC_003614 CR457444.3 coding downstream 66537 36657025 ~ 36658639 (+)
XLOC_003615 si:ch211-11c3.9 coding downstream 74871 36665359 ~ 36674376 (+)
XLOC_003369 CR854846.2 misc upstream 20464247 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 23875333 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 23893066 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 23901730 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 23907301 12679732 ~ 12680028 (+)
XLOC_003620 BX248521.3 non-coding downstream 404206 36994694 ~ 36994808 (+)

Expression


Co-expression Network