XLOC_036226 (si:dkey-8e10.3)


Basic Information

Item Value
gene id XLOC_036226
gene name si:dkey-8e10.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 10033326 ~ 10048059 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070815
ATGATTGAGCTGGGCTCAGTGGAGGATGGCAGCAGTCTGATAGACGAGCTGATGGAATTGACGTCTCAGAGTTTATGTAAGCTCGAGATTCCAGAGCATTTCAACATCATTAAAGAGATTGGCCGTGGCAAGTATGGCCGTGTGCTGCTGGTCACCCACAGATGCAAAGgCACTCCAATGGCTCTGAAAGTGCTCCCGAAGGCCTCCACCAAACTGCAGGGATTTCTCAGAGAATATTGCATCTCtctgcatctgtcctgtcatccCTGCATTGTAGGATTGTTTGGCATTGCCTTCCAGTCCAACGAGCACTACGGATTCGCCCAGGAGCTCGTCACAGGACGGGATCTGTTTGCCATCATTCAGCCACGGGTGGGCATCCCTGAATGTGCAGTGAAGCGCTGTGCCGTCCAGATCTCCTGTGCTCTGGAGTTCATCCACCAGCGAGGCCTGGTCCACCGCGATATCAAGCCAGAGAACGTCCTGCTGCTAGATAACCACTGCCGACGGGTCAAACTAGCTGATTTCGGCCTTACGCAGAGACAAGGAACTTTCATCCGCTTCATCTCTGGGACTCTTCCATACATGGCTCCAGAATTGTGTAAAATGGTGCTGGAGGATGGCCAAAAAGAGCCCAAAGTTCCTCCACTCCGTGTCGAACCCTCTCTAGACACCTGGGCCTTCGCTGTTCTTCTCTTCTGCATCCTCACCGGCTTCTTTCCATGGGAGCGCTGTAATGATAGCGACGATTTTTATGAGGAGTTTGCAGACTGGCGTCAATCGGTGAAGAAATCGCCAGTGCCGTCGCAGTGGAAAAGGTTTACACCAGTTTGTATGCAGATGTTTAAGAGAATGTTAACAATCGAGTCCAATAAAAGATGCTCGATAACAGAGGTTAAAGGTTATGTGGGAAAAGACTGGGTACGAGAGAAGGATGCCAACGGATGGGTGGGAGAAAATGGGGATATCTGTACTTCCACACCGAGTCCATGCAGGAGCAGCTATAGTGATGAATAG
>TCONS_00070816
CTCATTCATAGCGCTCTGCATTGGCACTGCTGTTACTGCTGCGCTTCTGGACGTCCTGATCCTTTGCACAGCTGCAGAGAGTCAGAACAGGCGGTGTGATGATTGAGCTGGGCTCAGTGGAGGATGGCAGCAGTCTGATAGACGAGCTGATGGAATTGACGTCTCAGAGTTTATGTAAGCTCGAGATTCCAGAGCATTTCAACATCATTAAAGAGATTGGCCGTGGCAAGTATGGCCGTGTGCTGCTGGTCACCCACAGATGCAAAGgCACTCCAATGGCTCTGAAAGTGCTCCCGAAGGCCTCCACCAAACTGCAGGGATTTCTCAGAGAATATTGCATCTCtctgcatctgtcctgtcatccCTGCATTGTAGGATTGTTTGGCATTGCCTTCCAGTCCAACGAGCACTACGGATTCGCCCAGGAGCTCGTCACAGGACGGGATCTGTTTGCCATCATTCAGCCACGGGTGGGCATCCCTGAATGTGCAGTGAAGCGCTGTGCCGTCCAGATCTCCTGTGCTCTGGAGTTCATCCACCAGCGAGGCCTGGTCCACCGCGATATCAAGCCAGAGAACGTCCTGCTGCTAGATAACCACTGCCGACGGGTCAAACTAGCTGATTTCGGCCTTACGCAGAGACAAGGAACTTTCATCCGCTTCATCTCTGGGACTCTTCCATACATGGCTCCAGAATTGTGTAAAATGGTGCTGGAGGATGGCCAAAAAGAGCCCAAAGTTCCTCCACTCCGTGTCGAACCCTCTCTAGACACCTGGGCCTTCGCTGTTCTTCTCTTCTGCATCCTCACCGGCTTCTTTCCATGGGAGCGCTGTAATGATAGCGACGATTTTTATGAGGAGTTTGCAGACTGGCGTCAATCGGTGAAGAAATCGCCAGTGCCGTCGCAGTGGAAAAGGTTTACACCAGTTTGTATGCAGATGTTTAAGAGAATGTTAACAATCGAGTCCAATAAAAGATGCTCGATAACAGAGGTTAAAGGTTATGTG

Function

symbol description
si:dkey-8e10.3 Predicted to enable MAP kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human SBK2 (SH3 domain binding kinase family member 2).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0000187 activation of MAPK activity biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0004708 MAP kinase kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-442 Predicted to enable MAP kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human SBK2 (SH3 domain binding kinase family member 2).

Ensembl:

ensembl_id ENSDARG00000058944

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070815 False 1017 mRNA 0.51 3 10033326 10045043
TCONS_00070816 True 1007 mRNA 0.51 4 10033434 10048059

Neighbor

gene id symbol gene type direction distance location
XLOC_036225 ptpn18 coding downstream 348454 9641252 ~ 9684872 (-)
XLOC_036224 plxna3 coding downstream 462815 9222684 ~ 9570511 (-)
XLOC_036223 slc6a8 coding downstream 914368 9052123 ~ 9118958 (-)
XLOC_036222 NA coding downstream 1000997 9029054 ~ 9032329 (-)
XLOC_036221 NA coding downstream 1065707 8957581 ~ 8967619 (-)
XLOC_036227 CT573497.2 coding upstream 3960 10052019 ~ 10052133 (-)
XLOC_036228 NA coding upstream 275266 10323325 ~ 10327056 (-)
XLOC_036229 FO834835.1 coding upstream 391666 10439725 ~ 10439844 (-)
XLOC_036230 nr1h5 coding upstream 855266 10903325 ~ 10932206 (-)
XLOC_036231 slc66a1 coding upstream 889464 10937523 ~ 10949847 (-)
XLOC_036220 NA non-coding downstream 1231640 8792139 ~ 8801686 (-)
XLOC_036219 NA non-coding downstream 1281318 8744792 ~ 8752008 (-)
XLOC_036217 CR457452.1 non-coding downstream 1441538 8591671 ~ 8591788 (-)
XLOC_036247 NA non-coding upstream 1981414 12029473 ~ 12125374 (-)
XLOC_036251 NA non-coding upstream 2403392 12451451 ~ 12669412 (-)

Expression


Co-expression Network