XLOC_036247


Basic Information

Item Value
gene id XLOC_036247
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 12029473 ~ 12125374 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072403
GTCAAGACTGTCGGTTTGAAGTTTTGTCGAAGATTTCGTTGCAGATTGTCAGtctaaaattacttttttattgtgtACAGTTTACATTAATCGAAACTAGAGAACACACCAGAGGTCACTAGACAGGAACCAGGAAGCGCTCCAGTGGAATCTTCTCATCGACCGGCATGTTGGGCATCACATAGGAGCGCAGCTCCACATCTCCTCTCGGCTTCTCCAGAATCACCACCTTAAAGAAACATACCAATCTGCTGTTTGAAGACGCTGTTTCATCTCCTGTCCTAATGAGTGGTGACTAAAATCTGATCAGAACCTTCAGTGCTATTCAGAAGATGTTCAAAGCATCAGTTGAGTGAAACAGTAATGGTGGTCACTGACAGAAACAACTATATTTGTGTAAATAACCATTCTACGGCAGACGTGAAACTtttcatcatggtcaactcctctctgcatctcaagtttgcCGACGTatatggcgagctactggacaaactagtaacagcaagaaagccgtccatatggaggtaagcggtcagctggtaagtgcgaaaaggagTGGCTTCATACCACCCcacatattttaaagacaatgGTTGGCAAAACAATGGTTTGCTTGGTTTTAACAtacctttattctttcatgagttatttacaagccccctcgCATAAACTAATGTGctacaaacaggacgttaatatccccaaccattcccattttattaaggtgtatctatataaatg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072403 True 744 lncRNA 0.42 5 12029473 12125374

Neighbor

gene id symbol gene type direction distance location
XLOC_036246 med27 coding downstream 41408 11884671 ~ 11988065 (-)
XLOC_036245 rapgef1a coding downstream 193866 11779547 ~ 11835607 (-)
XLOC_036244 anapc7 coding downstream 259381 11746483 ~ 11770092 (-)
XLOC_036243 fnbp1a coding downstream 389233 11578318 ~ 11640240 (-)
XLOC_036242 si:ch211-248e11.2 coding downstream 479200 11542852 ~ 11550273 (-)
XLOC_036248 dab2ipa coding upstream 8753 12134127 ~ 12264521 (-)
XLOC_036249 phf19 coding upstream 214873 12340247 ~ 12403077 (-)
XLOC_036250 traf1 coding upstream 283466 12408840 ~ 12432685 (-)
XLOC_036251 NA coding upstream 326077 12451451 ~ 12669412 (-)
XLOC_036252 CU639468.2 coding upstream 487398 12612772 ~ 12612888 (-)
XLOC_036229 FO834835.1 non-coding downstream 1589629 10439725 ~ 10439844 (-)
XLOC_036228 NA non-coding downstream 1702417 10323325 ~ 10327056 (-)
XLOC_036227 CT573497.2 non-coding downstream 1977340 10052019 ~ 10052133 (-)
XLOC_036222 NA non-coding downstream 2997144 9029054 ~ 9032329 (-)
XLOC_036221 NA non-coding downstream 3061854 8957581 ~ 8967619 (-)
XLOC_036253 NA non-coding upstream 561317 12686691 ~ 12710224 (-)
XLOC_036261 BX119975.1 non-coding upstream 1113599 13238973 ~ 13239092 (-)
XLOC_036263 NA non-coding upstream 1177305 13302679 ~ 13306048 (-)

Expression


Co-expression Network