XLOC_036253


Basic Information

Item Value
gene id XLOC_036253
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 12686691 ~ 12710224 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072404
CGCCATCAGGTGACACAAAATGCTCTGCCTCCCGCCGAAATGCCCGGTCCAGAGCAGAGCAGCTCCATCTGGGGCACCATCTGCTAGTTCACTCTCATTACCAGCAAGTCCAGCACCTCCCATGTTTTTATCAACAGaCTTTGATGCCACAAATAGCAACTAGGCCACAAATCTCCTGAAGTTCCTCCTATTGGTTTACAAACATCTGTGATTTTGCAACGATAAACGTCGGGACCTGACAGATGGGCATTTTCACAATTTGGCTGTTTTCTGAACCTCCTACCTGAAGCAGAAACGCAGAACCATTATGATATTCCTGGGTGGTGGTGCACTGTCTGTTGCTTTGGTCACTTTGTTATTGCCTAATGCACTAAATAAGTAAACCATATGTTCATTGGACAtaactaattattaatattaaaggggacctattatgccacattttacaagatttaaaataattctctgatgtctctagagtatGTGAAGATTCAGTTCAAAATTCCCCACACATAATGTTATATATCTCTTTAAAGCTTAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072404 True 541 lncRNA 0.41 3 12686691 12710224

Neighbor

gene id symbol gene type direction distance location
XLOC_036251 NA coding downstream 17279 12451451 ~ 12669412 (-)
XLOC_036252 CU639468.2 coding downstream 73803 12612772 ~ 12612888 (-)
XLOC_036250 traf1 coding downstream 254006 12408840 ~ 12432685 (-)
XLOC_036249 phf19 coding downstream 283614 12340247 ~ 12403077 (-)
XLOC_036248 dab2ipa coding downstream 422170 12134127 ~ 12264521 (-)
XLOC_036254 si:dkey-104n9.1 coding upstream 133076 12843300 ~ 12847486 (-)
XLOC_036255 slc2a6 coding upstream 143881 12854105 ~ 12867434 (-)
XLOC_036256 dennd2da coding upstream 279148 12989372 ~ 13029297 (-)
XLOC_036257 si:dkey-208b23.5 coding upstream 325997 13036221 ~ 13046089 (-)
XLOC_036258 si:dkey-208b23.5 coding upstream 342067 13052291 ~ 13064330 (-)
XLOC_036247 NA non-coding downstream 561317 12029473 ~ 12125374 (-)
XLOC_036229 FO834835.1 non-coding downstream 2246847 10439725 ~ 10439844 (-)
XLOC_036228 NA non-coding downstream 2359635 10323325 ~ 10327056 (-)
XLOC_036261 BX119975.1 non-coding upstream 528749 13238973 ~ 13239092 (-)
XLOC_036263 NA non-coding upstream 592455 13302679 ~ 13306048 (-)
XLOC_036277 NA non-coding upstream 1004718 13714942 ~ 13716577 (-)
XLOC_036279 CT025854.2 non-coding upstream 1167504 13877728 ~ 13877845 (-)
XLOC_036286 BX248385.1 non-coding upstream 1382570 14092794 ~ 14094516 (-)

Expression


Co-expression Network