XLOC_036267 (pimr106)


Basic Information

Item Value
gene id XLOC_036267
gene name pimr106
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 13441808 ~ 13442871 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070894
TCCTCTTGAAGTTGCACTTCTCATCCTCGCCCATGGAGTATCCAGCGTTCCAGAAATAATCCAGCTTCTGGACTGGCAGGACCAGGAGGACCATTATATAATGGTGTTGGAATACCCTTCACCCTGTGAGGACCTATATGCTTTCACAGAAAGCTATGGAGGATCCATAAGTGAAGATTTAGCGCGTGTTGTTATGCAGCAGGCAACTCAAGCTGCATACATGTGCTGCCGCAATGGTGTTCTACATCGCGATATCAAACTTGAAAATCTACTAATCAACAAGGAGACTCATAAAGTCAAATTAATAGACTTTGGGTGTGGAGACCTTCTCAAGAAATTACCCTACGATACATTTGCCGGCACCCTTGAGTACTGCCCCCCAGAGTTTGAGGAAACGGGTGAATACAATGGGAAGCCGGCAACAGTCTGGTCCCTTGGCATCCTCTTGTTCGTATTGGTGTGTGAGGACTTTCCCAACCCTCAAGAACTGCACATGATCAATGAGAACAACTTCTCCAAAGCTGGCTTGTCCGATGAATGCTGTCAGTTGATTAGTTGCTGTCTCCAGCAAAAGCCAGAGCAGCGGATTCAATTAAAAGAGATTCTTCTCCACGAATGGTTCAAGgacaCCAACCTGGAGAACTGAAGAACAGCCACCCTACATGTTATTGTCTTGAGAGGAACGTTTCAGGCTGTTTGAGGCAGGAAATCTTGAGCAGGAGGTGGCTCCtctcaaaacaaacaataaaacatatgcattaaTTGAA

Function

symbol description
pimr106 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-108 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000111894

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070894 True 767 mRNA 0.46 4 13441808 13442871

Neighbor

gene id symbol gene type direction distance location
XLOC_036266 CR354547.3 coding downstream 13068 13427678 ~ 13428740 (-)
XLOC_036265 pimr101 coding downstream 22759 13417986 ~ 13419049 (-)
XLOC_036264 ccdc124 coding downstream 76929 13351698 ~ 13364879 (-)
XLOC_036262 kcnn1b coding downstream 126241 13244371 ~ 13315567 (-)
XLOC_036263 NA coding downstream 135760 13302679 ~ 13306048 (-)
XLOC_036268 CR354547.2 coding upstream 10348 13453219 ~ 13454281 (-)
XLOC_036269 pimr105 coding upstream 27984 13470855 ~ 13471916 (-)
XLOC_036270 pimr104 coding upstream 42325 13485196 ~ 13486258 (-)
XLOC_036271 b3gnt3.1 coding upstream 91514 13534385 ~ 13541514 (-)
XLOC_036272 b3gnt3.2 coding upstream 129660 13572531 ~ 13574764 (-)
XLOC_036261 BX119975.1 non-coding downstream 202716 13238973 ~ 13239092 (-)
XLOC_036253 NA non-coding downstream 731584 12686691 ~ 12710224 (-)
XLOC_036251 NA non-coding downstream 772396 12451451 ~ 12669412 (-)
XLOC_036277 NA non-coding upstream 272071 13714942 ~ 13716577 (-)
XLOC_036279 CT025854.2 non-coding upstream 434857 13877728 ~ 13877845 (-)
XLOC_036286 BX248385.1 non-coding upstream 649923 14092794 ~ 14094516 (-)
XLOC_036294 BX294388.2 non-coding upstream 971482 14414353 ~ 14452438 (-)
XLOC_036296 NA non-coding upstream 1031898 14474769 ~ 14482457 (-)

Expression


Co-expression Network