XLOC_036446


Basic Information

Item Value
gene id XLOC_036446
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 24297371 ~ 24297670 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072457
CGTGAATAGATGTGTGTTTTTATCTTCCCTCTCGAGAATGAagcgaaataaaataaatgtttcaaagcGATTAGTTGCTACGGCTTTCTAGTCGGGCGCCATCAGCGTCTCCTCGCTTCCTGTCCTCAGAGCTGGCCGGAACTCCTTTATTGTCACGGGAAAAGACGAGTGCGGGAATCTTTTAATCGGTATTTTCAAtggaaaaacaattatttaaacattcaCGTTCTGTTTGGGAATATAGATATCGTCTATTTCGCTTAATATCATAGGTTTTCTGTCAAATAAAGTTGTAAACCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072457 True 300 lncRNA 0.39 1 24297371 24297670

Neighbor

gene id symbol gene type direction distance location
XLOC_036445 zgc:110353 coding downstream 44438 24246659 ~ 24252933 (-)
XLOC_036444 NA coding downstream 81549 24192699 ~ 24215822 (-)
XLOC_036443 adora1b coding downstream 162200 24122498 ~ 24135171 (-)
XLOC_036442 dclre1b coding downstream 183767 24107030 ~ 24113604 (-)
XLOC_036441 lhfpl5b coding downstream 412355 23876928 ~ 23885016 (-)
XLOC_036447 NA coding upstream 27578 24325248 ~ 24577568 (-)
XLOC_036448 pimr142 coding upstream 31763 24329433 ~ 24332284 (-)
XLOC_036449 CR450805.1 coding upstream 55049 24352719 ~ 24366726 (-)
XLOC_036450 NA coding upstream 122280 24419950 ~ 24497994 (-)
XLOC_036451 BX296549.1 coding upstream 124723 24422393 ~ 24502997 (-)
XLOC_036434 NA non-coding downstream 739449 23554027 ~ 23557922 (-)
XLOC_036432 NA non-coding downstream 907129 23387884 ~ 23390242 (-)
XLOC_036430 NA non-coding downstream 1047167 23240862 ~ 23250204 (-)
XLOC_036428 NA non-coding downstream 1077415 23217498 ~ 23219956 (-)
XLOC_036452 NA non-coding upstream 143858 24441528 ~ 24475095 (-)
XLOC_036455 NA non-coding upstream 482737 24780407 ~ 24780988 (-)
XLOC_036458 NA non-coding upstream 559316 24856986 ~ 24909039 (-)

Expression


Co-expression Network